RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 E5RJQ4 531 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 HCRTO43612 131 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 IGFBP6P24592 240 aaPredicted RBP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 PSMA2P25787 234 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 CETN2P41208 172 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 PLA2G4AP47712 749 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 CLCN6P51797 869 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 TAS2R40P59535 323 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 OGDHQ02218 1023 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 OR6B2Q6IFH4 312 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 TMCO3Q6UWJ1 677 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 CD300LGQ6UXG3 332 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 FAM183BPQ6ZVS7 135 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 ARCQ7LC44 396 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 POLNQ7Z5Q5 900 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 SLC13A5Q86YT5 568 aaPredicted RBP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 RCOR2Q8IZ40 523 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 FUKQ8N0W3 1084 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 CCDC26Q8TAB7 109 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 SYT15Q9BQS2 421 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 PAAF1Q9BRP4 392 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 DUSP16Q9BY84 665 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 HIPK3Q9H422 1215 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 DDX56Q9NY93 547 aaKnown RBP18.03■□□□□ 0.48
HDDC3-206ENST00000561036 STIM2Q9P246 746 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 CACNG4Q9UBN1 327 aa18.03■□□□□ 0.48
HDDC3-206ENST00000561036 FSCN2O14926 492 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ZRANB2O95218 330 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDDC3-206ENST00000561036 IBSPP21815 317 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-206ENST00000561036 TNFRSF8P28908 595 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ADORA2BP29275 332 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ZNF143P52747 638 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-206ENST00000561036 COPS2P61201 443 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 RBM10P98175 930 aaKnown RBP18.02■□□□□ 0.48
HDDC3-206ENST00000561036 SLC6A3Q01959 620 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 FAAP100Q0VG06 881 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 COLGALT2Q8IYK4 626 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 DNAJC5GQ8N7S2 189 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 JOSD2Q8TAC2 188 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 KCTD13Q8WZ19 329 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 RBM41Q96IZ5 413 aaKnown RBP18.02■□□□□ 0.48
HDDC3-206ENST00000561036 RUNDC3BQ96NL0 473 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ACBD6Q9BR61 282 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 CNPY3Q9BT09 278 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 AP1M1Q9BXS5 423 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ARFGAP3Q9NP61 516 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 TBC1D13Q9NVG8 400 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 ASNSD1Q9NWL6 643 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 PCDHB8Q9UN66 801 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 USTQ9Y2C2 406 aa18.02■□□□□ 0.48
HDDC3-206ENST00000561036 F8VP50 259 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 DPYSL4O14531 572 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 KRT7P08729 469 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 NPR3P17342 541 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 GPD1P21695 349 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 SSR1P43307 286 aaKnown RBP18.01■□□□□ 0.47
HDDC3-206ENST00000561036 RGS7P49802 495 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 ATN1P54259 1190 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-206ENST00000561036 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 VSNL1P62760 191 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 TLE2Q04725 743 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 CYP1B1Q16678 543 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 HADHQ16836 314 aaKnown RBP18.01■□□□□ 0.47
HDDC3-206ENST00000561036 MAP9Q49MG5 647 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 MAATS1Q7Z4T9 603 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 KLHL7Q8IXQ5 586 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 ABI1Q8IZP0 508 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 THEM5Q8N1Q8 247 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 MYCBPAPQ8TBZ2 947 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-206ENST00000561036 LPIN3Q9BQK8 851 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 UBXN6Q9BZV1 441 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 CRTAC1Q9NQ79 661 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 TANC1Q9C0D5 1861 aa18.01■□□□□ 0.47
HDDC3-206ENST00000561036 C2CD4BA6NLJ0 364 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 TULP2O00295 520 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 PAPSS1O43252 624 aaPredicted RBP18■□□□□ 0.47
HDDC3-206ENST00000561036 SART1O43290 800 aaKnown RBP18■□□□□ 0.47
HDDC3-206ENST00000561036 ATP8B1O43520 1251 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 TRAPPC3O43617 180 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 PHF2O75151 1096 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 ATP2C2O75185 946 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 RNF8O76064 485 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 DDHD2O94830 711 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 FAM200BP0CF97 657 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 DESP17661 470 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 ACAT1P24752 427 aaKnown RBP18■□□□□ 0.47
HDDC3-206ENST00000561036 TKTP29401 623 aaKnown RBP18■□□□□ 0.47
HDDC3-206ENST00000561036 CHRNA3P32297 505 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 PTPN7P35236 360 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 RFC2P35250 354 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 PCK1P35558 622 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 GJA8P48165 433 aa18■□□□□ 0.47
HDDC3-206ENST00000561036 RNASELQ05823 741 aaKnown RBP18■□□□□ 0.47
HDDC3-206ENST00000561036 MAPRE1Q15691 268 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms