RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 NXPE3Q969Y0 559 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 CYFIP2Q96F07 1278 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 FUBP3Q96I24 572 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 CNOT6LQ96LI5 555 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 NT5C1BQ96P26 610 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 KXD1Q9BQD3 176 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 B3GNT5Q9BYG0 378 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 BCO2Q9BYV7 579 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 GPR88Q9GZN0 384 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 DNAJC25Q9H1X3 360 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 THAP9Q9H5L6 903 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 APOBEC3GQ9HC16 384 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 ZNF334Q9HCZ1 680 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 EPS15L1Q9UBC2 864 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 UXTQ9UBK9 157 aaPredicted RBP9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 NME7Q9Y5B8 376 aa9.6□□□□□ -0.87
SNRPA1-214ENST00000560987 TRIM66O15016 1216 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 AP1G2O75843 785 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 MICAL2O94851 1124 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 TPM2P07951 284 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PTMSP20962 102 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CDK11BP21127 795 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CDC25CP30307 473 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 MAGEA11P43364 429 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 ASPAP45381 313 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CFAP221Q4G0U5 840 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CT47A1Q5JQC4 288 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PRSS36Q5K4E3 855 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PARM1Q6UWI2 310 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 RRAGAQ7L523 313 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 TRIM59Q8IWR1 403 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 SUGP1Q8IWZ8 645 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 YAF2Q8IY57 180 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 UBALD2Q8IYN6 164 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CRYBG2Q8N1P7 616 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PPM1KQ8N3J5 372 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 C12orf29Q8N999 325 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 TTC16Q8NEE8 873 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 MRPS31Q92665 395 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PBXIP1Q96AQ6 731 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 ZSWIM3Q96MP5 696 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PKMYT1Q99640 499 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PRRX2Q99811 253 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CRACR2AQ9BSW2 395 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 ZNF518BQ9C0D4 1074 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 ELOVL4Q9GZR5 314 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 ZFP14Q9HCL3 533 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 CISHQ9NSE2 258 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 FAM49BQ9NUQ9 324 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 EHD2Q9NZN4 543 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 COQ4Q9Y3A0 265 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 PCDHB4Q9Y5E5 795 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 NUMBLQ9Y6R0 609 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 C5orf42Q9H799 3197 aa9.59□□□□□ -0.87
SNRPA1-214ENST00000560987 F8VP50 259 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 P4HA2O15460 535 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 LETM1O95202 739 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 CCDC130P13994 396 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 RFX1P22670 979 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 EPHA5P54756 1037 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 MAP3K7CLP57077 242 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 CYP4F8P98187 520 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 CUL2Q13617 745 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 STX1AQ16623 288 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 FAM78AQ5JUQ0 283 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TANGO2Q6ICL3 276 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 GBP6Q6ZN66 633 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TRIM67Q6ZTA4 783 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 DENND5BQ6ZUT9 1274 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 GAREM2Q75VX8 874 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 BMP8AQ7Z5Y6 402 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 NUP93Q8N1F7 819 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 MAB21L3Q8N8X9 362 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 SHKBP1Q8TBC3 707 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 ZSCAN18Q8TBC5 510 aaPredicted RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 SLC2A14Q8TDB8 520 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 FGF14Q92915 247 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 JAKMIP2Q96AA8 810 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 SMARCD1Q96GM5 515 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TMEM176AQ96HP8 235 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 FAXDC2Q96IV6 333 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 SPATA17Q96L03 361 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 MED15Q96RN5 788 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 KCNK16Q96T55 309 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TUBGCP2Q9BSJ2 902 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 RPP25Q9BUL9 199 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 LRRC3Q9BY71 257 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 NAT10Q9H0A0 1025 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
SNRPA1-214ENST00000560987 TRPC7Q9HCX4 862 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms