RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PCDHB2Q9Y5E7 798 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 F8VP50 259 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 ITGA2BP08514 1039 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 NRLP54845 237 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 DHDDSQ86SQ9 333 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 IGDCC3Q8IVU1 814 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 PCDH9Q9HC56 1237 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 ADAMTS6Q9UKP5 1117 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 TBC1D30Q9Y2I9 924 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 INHBAP08476 426 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 BPIFB4P59827 614 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 PSMC5P62195 406 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 KBTBD12Q3ZCT8 623 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 MMEL1Q495T6 779 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 DNAL1Q4LDG9 190 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 FAM102BQ5T8I3 360 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 PPIL6Q8IXY8 311 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 EFCAB3Q8N7B9 438 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 POU5F2Q8N7G0 328 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 FAM172AQ8WUF8 416 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 SHCBP1LQ9BZQ2 653 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 DDX18Q9NVP1 670 aaKnown RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 HSFX1Q9UBD0 423 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 PRR12Q9ULL5 1215 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 IQANK1A0A1B0GTG1 560 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 CYB561D2O14569 222 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 COPEO14579 308 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 PMM2O15305 246 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 ZSCAN9O15535 394 aaPredicted RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 PDE5AO76074 875 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 TMEM63AO94886 807 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 UQCRBP14927 111 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 VCLP18206 1134 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 GTF2BQ00403 316 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 TMCO4Q5TGY1 634 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 CES4AQ5XG92 561 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 FEZF2Q8TBJ5 459 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 GDPD5Q8WTR4 605 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 LENG1Q96BZ8 264 aaPredicted RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 SLC13A1Q9BZW2 595 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 KCNK4Q9NYG8 393 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
TPM1-228ENST00000560975 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
TPM1-228ENST00000560975 DDTLA6NHG4 134 aaPredicted RBP17.23■□□□□ 0.35
TPM1-228ENST00000560975 YWHAGP61981 247 aaKnown RBP eCLIP17.23■□□□□ 0.35
TPM1-228ENST00000560975 CHI3L2Q15782 390 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 XPO7Q9UIA9 1087 aaKnown RBP17.23■□□□□ 0.35
TPM1-228ENST00000560975 DRG1Q9Y295 367 aaKnown RBP17.23■□□□□ 0.35
TPM1-228ENST00000560975 SNCAIPQ9Y6H5 919 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 A0A088AWK7 358 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 POLR2MP0CAP2 368 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 RARRES1P49788 294 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 BASP1P80723 227 aaKnown RBP17.23■□□□□ 0.35
TPM1-228ENST00000560975 HIC1Q14526 733 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 PDK3Q15120 406 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 TRIP10Q15642 601 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 CIAPIN1Q6FI81 312 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 CTAGE3PQ8IX95 158 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 EBF4Q9BQW3 602 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 KLHL4Q9C0H6 718 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 GPAMQ9HCL2 828 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 COL24A1Q17RW2 1714 aa17.23■□□□□ 0.35
TPM1-228ENST00000560975 hCG_1818297A0A087WSY0 165 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 FKBP6O75344 327 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 RPS6KA4O75676 772 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 NOMO3P69849 1222 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 HNRNPDQ14103 355 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 EFHC1Q5JVL4 640 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 DRICH1Q6PGQ1 229 aaPredicted RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 TMEM270Q6UE05 265 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 RBM44Q6ZP01 1051 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 NCAPG2Q86XI2 1143 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 CYP4F11Q9HBI6 524 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 CNTN3Q9P232 1028 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 TRIM49D1C9J1S8 452 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 IMPDH2P12268 514 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 SERPINB6P35237 376 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 RPL22P35268 128 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 ELK3P41970 407 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 GRAMD1BQ3KR37 738 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 ZCCHC23Q6ZST2 131 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 PDIK1LQ8N165 341 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 ABTB1Q969K4 478 aaPredicted RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 MCEEQ96PE7 176 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 WWP1Q9H0M0 922 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 ITGAVP06756 1048 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 TPP2P29144 1249 aaPredicted RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 STIP1P31948 543 aaKnown RBP17.22■□□□□ 0.35
TPM1-228ENST00000560975 IRX4P78413 519 aa17.22■□□□□ 0.35
TPM1-228ENST00000560975 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms