RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SCNN1AP37088 669 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 PTGIRP43119 386 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 PLA2G4AP47712 749 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 COPS2P61201 443 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 UPP1Q16831 310 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 FAM102AQ5T9C2 384 aaPredicted RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 OLFML1Q6UWY5 402 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 FAM183BPQ6ZVS7 135 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 ARFGAP1Q8N6T3 406 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 SPATA18Q8TC71 538 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 SLCO2A1Q92959 643 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 HNRNPABQ99729 332 aaKnown RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 DDX56Q9NY93 547 aaKnown RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 C2CD4BA6NLJ0 364 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 C9IYK1 514 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 TULP2O00295 520 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 EOMESO95936 686 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 LHX1P48742 406 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 FAM189BP81408 668 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 SLC25A11Q02978 314 aaKnown RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 WSCD1Q658N2 575 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 TTC27Q6P3X3 843 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 KRT222Q8N1A0 295 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 EMC1Q8N766 993 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 SH3TC2Q8TF17 1288 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 UROC1Q96N76 676 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 HERPUD2Q9BSE4 406 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 OSBPL8Q9BZF1 889 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 RAB17Q9H0T7 212 aa13.59□□□□□ -0.23
SNX1-211ENST00000560829 UTP11Q9Y3A2 253 aaKnown RBP13.59□□□□□ -0.23
SNX1-211ENST00000560829 GABBR2O75899 941 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 KRT7P08729 469 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 RALAP11233 206 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 CCDC130P13994 396 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 ECHS1P30084 290 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 PCK1P35558 622 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 COILP38432 576 aaPredicted RBP13.58□□□□□ -0.24
SNX1-211ENST00000560829 CETN2P41208 172 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 SSR1P43307 286 aaKnown RBP13.58□□□□□ -0.24
SNX1-211ENST00000560829 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
SNX1-211ENST00000560829 TUSC3Q13454 348 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 OR6B2Q6IFH4 312 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.24
SNX1-211ENST00000560829 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 RTN4RL1Q86UN2 441 aaPredicted RBP13.58□□□□□ -0.24
SNX1-211ENST00000560829 JAMLQ86YT9 394 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 SLC2A14Q8TDB8 520 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 CNPY3Q9BT09 278 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 UNC93B1Q9H1C4 597 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 HOMER3Q9NSC5 361 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 NFU1Q9UMS0 254 aa13.58□□□□□ -0.24
SNX1-211ENST00000560829 DNAH12Q6ZR08 3092 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 DPYSL4O14531 572 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 PAPSS1O43252 624 aaPredicted RBP13.57□□□□□ -0.24
SNX1-211ENST00000560829 SELPP16109 830 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
SNX1-211ENST00000560829 GPD1P21695 349 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 ACADSBP45954 432 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 RGS7P49802 495 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 SLC6A3Q01959 620 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 TRADDQ15628 312 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
SNX1-211ENST00000560829 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 DUPD1Q68J44 220 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 TXNRD3NBQ6F5E7 133 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 ARCQ7LC44 396 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 FAM126BQ8IXS8 530 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 RNF169Q8NCN4 708 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 LINC01599Q8WXQ3 324 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 KHSRPQ92945 711 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■□□□□ 9.7
SNX1-211ENST00000560829 PIWIL1Q96J94 861 aaKnown RBP13.57□□□□□ -0.24
SNX1-211ENST00000560829 FTHL17Q9BXU8 183 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 PLEKHA4Q9H4M7 779 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 ASNSD1Q9NWL6 643 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 CACNG4Q9UBN1 327 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 RASAL2Q9UJF2 1139 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 EFR3BQ9Y2G0 817 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 CASTOR2A6NHX0 329 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 XPO1O14980 1071 aaKnown RBP13.57□□□□□ -0.24
SNX1-211ENST00000560829 POMCP01189 267 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 KRT1P04264 644 aa13.57□□□□□ -0.24
SNX1-211ENST00000560829 CYP11A1P05108 521 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms