RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	CDKL5	O76039	1030 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	ERBB2	P04626	1255 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	EGR2	P11161	476 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	NEFH	P12036	1026 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	TRAPPC10	P48553	1259 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	RBM5	P52756	815 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	KRTAP10-11	P60412	298 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	CBX1	P83916	185 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	OCRL	Q01968	901 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	MEF2A	Q02078	507 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	BMT2	Q1RMZ1	405 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	C19orf54	Q5BKX5	351 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	DNAJC21	Q5F1R6	531 aa	Known RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	ABHD15	Q6UXT9	468 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	CREBRF	Q8IUR6	639 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	CNTROB	Q8N137	903 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	ZNF610	Q8N9Z0	462 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	TEX19	Q8NA77	164 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	MNS1	Q8NEH6	495 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	OR14C36	Q8NHC7	312 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	RUNDC1	Q96C34	613 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	LRFN3	Q9BTN0	628 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	INO80B	Q9C086	356 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	WNT8A	Q9H1J5	351 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	EVL	Q9UI08	416 aa	Predicted RBP	4.97	□□□□□ -1.61
BLM-209	ENST00000560559	TAGLN3	Q9UI15	199 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	LZTS1	Q9Y250	596 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	SCIN	Q9Y6U3	715 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	PRUNE2	Q8WUY3	3088 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	PPIP5K1	Q6PFW1	1433 aa		4.97	□□□□□ -1.61
BLM-209	ENST00000560559	ANKRD30A	Q9BXX3	1397 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	TCEA3	O75764	348 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	DDN	O94850	711 aa	Predicted RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	SNUPN	O95149	360 aa	Known RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	GAST	P01350	101 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	SKIL	P12757	684 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	BPI	P17213	487 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	VCAM1	P19320	739 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	FDXR	P22570	491 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	MPL	P40238	635 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	PKN2	Q16513	984 aa	Known RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	ATP2B3	Q16720	1220 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	FRMD7	Q6ZUT3	714 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	ACRBP	Q8NEB7	543 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	SNX33	Q8WV41	574 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	ELAC2	Q9BQ52	826 aa	Known RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	SLC13A1	Q9BZW2	595 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	RANBP17	Q9H2T7	1088 aa	Known RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	PPCS	Q9HAB8	311 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	GPRC5D	Q9NZD1	345 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	ANKRD6	Q9Y2G4	727 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	PPP2R3B	Q9Y5P8	575 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	NOX1	Q9Y5S8	564 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	DDX49	Q9Y6V7	483 aa	Known RBP	4.96	□□□□□ -1.62
BLM-209	ENST00000560559	C5	P01031	1676 aa		4.96	□□□□□ -1.62
BLM-209	ENST00000560559	HTT	P42858	3142 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	ABCC11	Q96J66	1382 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559		K7ESF4	209 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	ANP32C	O43423	234 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	EPB41L2	O43491	1005 aa	Known RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	IPO7	O95373	1038 aa	Known RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CFI	P05156	583 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	TPM3	P06753	285 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	MYL3	P08590	195 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	FAM163B	P0C2L3	166 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CCND1	P24385	295 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CYP2C19	P33261	490 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	SCNN1B	P51168	640 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CHN2	P52757	468 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	PHC1	P78364	1004 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	NEXN	Q0ZGT2	675 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	GTF2H3	Q13889	308 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	GBX1	Q14549	363 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CDC37	Q16543	378 aa	Predicted RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	TMEM240	Q5SV17	173 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CCDC70	Q6NSX1	233 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	LHFPL2	Q6ZUX7	228 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	C11orf74	Q86VG3	221 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CPXCR1	Q8N123	301 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	DEFB123	Q8N688	67 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	CEP95	Q96GE4	821 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	STRBP	Q96SI9	672 aa	Known RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	HERPUD2	Q9BSE4	406 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	MS4A5	Q9H3V2	200 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	ZHX3	Q9H4I2	956 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	IP6K2	Q9UHH9	426 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	ISY1	Q9ULR0	285 aa	Known RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	SUFU	Q9UMX1	484 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	LUC7L2	Q9Y383	392 aa	Known RBP	4.95	□□□□□ -1.62
BLM-209	ENST00000560559	KNSTRN	Q9Y448	316 aa		4.95	□□□□□ -1.62
BLM-209	ENST00000560559	MAST3	O60307	1309 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms