RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 NEK1Q96PY6 1258 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 STK32BQ9NY57 414 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 HMG20BQ9P0W2 317 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 USP25Q9UHP3 1055 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 CCNL1Q9UK58 526 aaPredicted RBP5□□□□□ -1.61
TMOD3-207ENST00000560549 SMC3Q9UQE7 1217 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 NIP7Q9Y221 180 aaKnown RBP eCLIP5□□□□□ -1.61
TMOD3-207ENST00000560549 CNPY2Q9Y2B0 182 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 NUMBLQ9Y6R0 609 aa5□□□□□ -1.61
TMOD3-207ENST00000560549 DDX49Q9Y6V7 483 aaKnown RBP5□□□□□ -1.61
TMOD3-207ENST00000560549 POLR2AP24928 1970 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 WDR33Q9C0J8 1336 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ANO9A1A5B4 782 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 KLRG2A4D1S0 409 aaPredicted RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 KLHL33A6NCF5 533 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 VSTM5A8MXK1 200 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 E7EWF7 191 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 MTSS1O43312 755 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 TMEM127O75204 238 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 CTDNEP1O95476 244 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 JUNP05412 331 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 PTMSP20962 102 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ADD2P35612 726 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 FXR1P51114 621 aaKnown RBP eCLIP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 LGALS4P56470 323 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 HAND2P61296 217 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 MRPS9P82933 396 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ELAVL1Q15717 326 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 SLC15A2Q16348 729 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 MUM1Q2TAK8 710 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ZSCAN23Q3MJ62 389 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 PARP10Q53GL7 1025 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 KRT40Q6A162 431 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 FAM173BQ6P4H8 233 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 EPM2AIP1Q7L775 607 aaPredicted RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 CHST3Q7LGC8 479 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 UNC5BQ8IZJ1 945 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 CMTM4Q8IZR5 234 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 AMER2Q8N7J2 671 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 UIMC1Q96RL1 719 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 STRBPQ96SI9 672 aaKnown RBP4.99□□□□□ -1.61
TMOD3-207ENST00000560549 TCF25Q9BQ70 676 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 MRIQ9BWK5 157 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 WNT8AQ9H1J5 351 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 GRPEL1Q9HAV7 217 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ANLNQ9NQW6 1124 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 NCDNQ9UBB6 729 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 DPP7Q9UHL4 492 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 PRSS50Q9UI38 385 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ZBTB21Q9ULJ3 1066 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 ZNF831Q5JPB2 1677 aa4.99□□□□□ -1.61
TMOD3-207ENST00000560549 QSER1Q2KHR3 1735 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 A0A1W2PR48 441 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 NPHP1O15259 732 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 NARSO43776 548 aaKnown RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 PFKFB2O60825 505 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 RPS6KA4O75676 772 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 TCEA3O75764 348 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 ALDH1A2O94788 518 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 SNUPNO95149 360 aaKnown RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 FAM163BP0C2L3 166 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 LPOP22079 712 aaPredicted RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 NEK3P51956 506 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 HMGA2P52926 109 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 SLC25A3Q00325 362 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 CHRNDQ07001 517 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 PPARAQ07869 468 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 PICALMQ13492 652 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 SPIDRQ14159 915 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 KRT32Q14532 448 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 PUM3Q15397 648 aaKnown RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 CLUL1Q15846 466 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 GPR162Q16538 588 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 SLC10A5Q5PT55 438 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 FKBP15Q5T1M5 1219 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 L1TD1Q5T7N2 865 aaKnown RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 LILRA3Q8N6C8 439 aaPredicted RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 LPIN2Q92539 896 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 GTF3C6Q969F1 213 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 TIFAQ96CG3 184 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 ZNF512Q96ME7 567 aaPredicted RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 AURKAIP1Q9NWT8 199 aaPredicted RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 GIT1Q9Y2X7 761 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 DAAM1Q9Y4D1 1078 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.98□□□□□ -1.61
TMOD3-207ENST00000560549 HS3ST3A1Q9Y663 406 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 CDY2AQ9Y6F7 541 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 ABCC12Q96J65 1359 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 C4BP0C0L5 1744 aa4.98□□□□□ -1.61
TMOD3-207ENST00000560549 MROH5Q6ZUA9 1318 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 ZNF532Q9HCE3 1301 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 CASZ1Q86V15 1759 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 GPAA1O43292 621 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 DAPK3O43293 454 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 SUV39H1O43463 412 aa4.97□□□□□ -1.61
TMOD3-207ENST00000560549 PRKAB2O43741 272 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms