RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	KRT85	P78386	507 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	SP2	Q02086	613 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	UBAP2	Q5T6F2	1119 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	C10orf25	Q5T742	122 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	KIRREL2	Q6UWL6	708 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	TTC7B	Q86TV6	843 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	GALNT4	Q8N4A0	578 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	NSUN6	Q8TEA1	469 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	COA7	Q96BR5	231 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	GPATCH3	Q96I76	525 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	FAXDC2	Q96IV6	333 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	SIDT1	Q9NXL6	827 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	CFAP97	Q9P2B7	532 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA8	Q9Y5G5	932 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA7	Q9Y5G6	932 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA6	Q9Y5G7	932 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHGA3	Q9Y5H0	932 aa		4.57	□□□□□ -1.68
SLTM-223	ENST00000560532	WASHC2C	Q9Y4E1	1318 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	LRRC14B	A6NHZ5	514 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	NT5C1B-RDH14	C9J2C7	533 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532		H7C1Q1	480 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	TLR5	O60602	858 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	EXOC3	O60645	756 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	KATNA1	O75449	491 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	KRTAP5-9	P26371	169 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	GCLC	P48506	637 aa	Predicted RBP	4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	EVA1C	P58658	441 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	GTF2H3	Q13889	308 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	SERPINA13P	Q6UXR4	307 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	C18orf65	Q6ZTR6	163 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	DTX2	Q86UW9	622 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	C1orf43	Q9BWL3	253 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	GPR35	Q9HC97	309 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	GNL3L	Q9NVN8	582 aa	Known RBP	4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	RLIM	Q9NVW2	624 aa		4.56	□□□□□ -1.68
SLTM-223	ENST00000560532	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	PSG1	P11464	419 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	KRTAP10-5	P60370	271 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	DSC2	Q02487	901 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	GHRHR	Q02643	423 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	BOP1	Q14137	746 aa	Known RBP	4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	NPY5R	Q15761	445 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	PTPRO	Q16827	1216 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	TMEM108	Q6UXF1	575 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	FAM177A1	Q8N128	213 aa	Predicted RBP	4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	EFHD1	Q9BUP0	239 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	POT1	Q9NUX5	634 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	SERPINB13	Q9UIV8	391 aa		4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	CCNL1	Q9UK58	526 aa	Predicted RBP	4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	CFAP20	Q9Y6A4	193 aa	Known RBP	4.55	□□□□□ -1.68
SLTM-223	ENST00000560532	UBE2Q2L	H0YL09	131 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	MYBL2	P10244	700 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	RARB	P10826	455 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	CDKN2A	P42771	156 aa	Known RBP	4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	PIK3CG	P48736	1102 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	ITK	Q08881	620 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	FAM50A	Q14320	339 aa	Known RBP	4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	ABCB5	Q2M3G0	1257 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	UAP1L1	Q3KQV9	507 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	ZNF585B	Q52M93	769 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	PARS2	Q7L3T8	475 aa	Known RBP	4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	USP37	Q86T82	979 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	ZCRB1	Q8TBF4	217 aa	Known RBP	4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	TEKT5	Q96M29	485 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	MMS19	Q96T76	1030 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	ASPSCR1	Q9BZE9	553 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	SIK2	Q9H0K1	926 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	SERTAD3	Q9UJW9	196 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	SH2B3	Q9UQQ2	575 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	PCDHA3	Q9Y5H8	950 aa		4.54	□□□□□ -1.68
SLTM-223	ENST00000560532	TNKS	O95271	1327 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	SHTN1	A0MZ66	631 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	CHRM5	P08912	532 aa	Predicted RBP	4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	T-ENOL	P0DO92	83 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	PRDX5	P30044	214 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	GPSM2	P81274	684 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	KIF22	Q14807	665 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	MEX3C	Q5U5Q3	659 aa	Known RBP	4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	ATG9B	Q674R7	924 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	TERB1	Q8NA31	727 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	TNPO1	Q92973	898 aa	Known RBP	4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	MTMR8	Q96EF0	704 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	SLC13A1	Q9BZW2	595 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	SLCO5A1	Q9H2Y9	848 aa		4.53	□□□□□ -1.68
SLTM-223	ENST00000560532	ANKRD62	A6NC57	917 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532		B4DGG1	531 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532		M0QYG6	137 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	GAS8-AS1	O95177	125 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	TOMM40	O96008	361 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	RENBP	P51606	427 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	ALDH5A1	P51649	535 aa	Predicted RBP	4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	ZNF91	Q05481	1191 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	TCF15	Q12870	199 aa		4.52	□□□□□ -1.69
SLTM-223	ENST00000560532	ICE2	Q659A1	982 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms