RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 KCTD10Q9H3F6 313 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 MKNK2Q9HBH9 465 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC4CQ9HCJ2 640 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 SNX24Q9Y343 169 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 DCCP43146 1447 aa6.3□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF536O15090 1300 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PRAMEF27A3QJZ7 478 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CALUO43852 315 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CCDC22O60826 627 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 EDF1O60869 148 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CSDE1O75534 798 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 TMCC1O94876 653 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ATE1O95260 518 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PSMG1O95456 288 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ECEL1O95672 775 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 TTC4O95801 387 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 IL1BP01584 269 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CYP11A1P05108 521 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PDHA1P08559 390 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CDC25CP30307 473 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 COILP38432 576 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CDK7P50613 346 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 GALCP54803 685 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 POLE2P56282 527 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CDR2Q01850 454 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SULT2A1Q06520 285 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PTK6Q13882 451 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 MAP7Q14244 749 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SPARCL1Q14515 664 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 INPP5AQ14642 412 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 MYBPC3Q14896 1274 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 KRT72Q14CN4 511 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 POU4F3Q15319 338 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 EPHA7Q15375 998 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 TCEA2Q15560 299 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PDK4Q16654 411 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CNPY1Q3B7I2 92 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 LIN52Q52LA3 116 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 DDX60LQ5H9U9 1706 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 RNF220Q5VTB9 566 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SNX30Q5VWJ9 437 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 OVOS1Q6IE37 1185 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 MIGA2Q7L4E1 593 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 EEPD1Q7L9B9 569 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 KIAA0907Q7Z7F0 614 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ST13P4Q8IZP2 240 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PRELID2Q8N945 189 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ERP27Q96DN0 273 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZNF184Q99676 751 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZSWIM1Q9BR11 485 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SPATA16Q9BXB7 569 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CRNKL1Q9BZJ0 848 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 DHX36Q9H2U1 1008 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CDC42EP4Q9H3Q1 356 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 LRRC19Q9H756 370 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SYNCQ9H7C4 482 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PIDD1Q9HB75 910 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 SIX2Q9NPC8 291 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PICK1Q9NRD5 415 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZDHHC7Q9NXF8 308 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 EURLQ9NYK6 297 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 LRP2BPQ9P2M1 347 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ITGB1BP2Q9UKP3 347 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZMYND8Q9ULU4 1186 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CHKBQ9Y259 395 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 PCDHA2Q9Y5H9 948 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 CSADQ9Y600 493 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 ZMYM2Q9UBW7 1377 aa6.29□□□□□ -1.4
SNRPA1-209ENST00000560307 UBE4BO95155 1302 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 SPATA31A1Q5TZJ5 1347 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ARFGEF1Q9Y6D6 1849 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FAM47DPA6NHR8 397 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 LINC01387J3KSC0 135 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PDXKO00764 312 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 CCNT1O60563 726 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 MAGEC1O60732 1142 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 ZBED4O75132 1171 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PABPC4LP0CB38 370 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 T-ENOLP0DO92 83 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 TROVE2P10155 538 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 KRT13P13646 458 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 IDO1P14902 403 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 GM2AP17900 193 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 FGFR4P22455 802 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 PON1P27169 355 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 MAOBP27338 520 aa6.28□□□□□ -1.4
SNRPA1-209ENST00000560307 CRABP2P29373 138 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms