RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 BST2Q10589 180 aaKnown RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 NFE2Q16621 373 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 GOLGA7BQ2TAP0 167 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 PPP1R26Q5T8A7 1209 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 FAM171A1Q5VUB5 890 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 PPP2R2DQ66LE6 453 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 ZNF280DQ6N043 979 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 FUT10Q6P4F1 479 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CD300LGQ6UXG3 332 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CEP57Q86XR8 500 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 MCOLN2Q8IZK6 566 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 DEFB123Q8N688 67 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 C12orf29Q8N999 325 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 KIF18AQ8NI77 898 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 MYCBPAPQ8TBZ2 947 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 STK32AQ8WU08 396 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 ZNF653Q96CK0 615 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 C18orf8Q96DM3 657 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 IGSF21Q96ID5 467 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 C16orf45Q96MC5 204 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 TWNKQ96RR1 684 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 PCDHB18PQ96TA0 734 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CWH43Q9H720 699 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CYLDQ9NQC7 956 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 FAM49BQ9NUQ9 324 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 PARVAQ9NVD7 372 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CTTNBP2NLQ9P2B4 639 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 UVRAGQ9P2Y5 699 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 CNOT8Q9UFF9 292 aaKnown RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 HMGXB4Q9UGU5 601 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 GTF3C4Q9UKN8 822 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 TSPAN16Q9UKR8 245 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 NENFQ9UMX5 172 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 SSX2IPQ9Y2D8 614 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 YBX2Q9Y2T7 364 aaKnown RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 TIMM13Q9Y5L4 95 aaPredicted RBP6.8□□□□□ -1.32
SPG11-221ENST00000560299 IRAK3Q9Y616 596 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 MYH10P35580 1976 aa6.8□□□□□ -1.32
SPG11-221ENST00000560299 NCOR1O75376 2440 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 CTAGE9A4FU28 777 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 NT5C1B-RDH14C9J2C7 533 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 I3L4J1 428 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 MYO1FO00160 1098 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 LPXNO60711 386 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 PAPLNO95428 1278 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 CALCAP01258 141 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 CYP1A2P05177 515 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ITGB1P05556 798 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 NPR3P17342 541 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 FGFR3P22607 806 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 MMP8P22894 467 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ACAT1P24752 427 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 ADORA2BP29275 332 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 TKTP29401 623 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 CASQ1P31415 396 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 PBX2P40425 430 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ARHGAP25P42331 645 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 GPD2P43304 727 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 PSMC1P62191 440 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 CREMQ03060 361 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ORC1Q13415 861 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ZNF268Q14587 947 aaPredicted RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 TCEAL1Q15170 157 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 PTPROQ16827 1216 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 CTXN3Q4LDR2 81 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 MDH1BQ5I0G3 518 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 ZNF569Q5MCW4 686 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 DENND1BQ6P3S1 775 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 FAM171BQ6P995 826 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 NYAP1Q6ZVC0 841 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 RTL10Q7L3V2 364 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 OSTM1Q86WC4 334 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ZDHHC17Q8IUH5 632 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 SPATA2LQ8IUW3 424 aaPredicted RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 PASD1Q8IV76 773 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 COLGALT1Q8NBJ5 622 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 C1orf131Q8NDD1 294 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 UBA3Q8TBC4 463 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 SLC35G2Q8TBE7 412 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 SLC2A14Q8TDB8 520 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 C2orf15Q8WU43 125 aaKnown RBP6.79□□□□□ -1.32
SPG11-221ENST00000560299 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 SMARCD1Q96GM5 515 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 FUBP3Q96I24 572 aaKnown RBP eCLIP6.79□□□□□ -1.32
SPG11-221ENST00000560299 LRCH3Q96II8 777 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 HSFY1Q96LI6 401 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 GUCD1Q96NT3 240 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 C11orf70Q9BRQ4 267 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 DUSP16Q9BY84 665 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 GPR62Q9BZJ7 368 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 UBXN6Q9BZV1 441 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 THAP2Q9H0W7 228 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 DPEP3Q9H4B8 488 aa6.79□□□□□ -1.32
SPG11-221ENST00000560299 ST7Q9NRC1 585 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms