RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 CD59P13987 128 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 DPP6P42658 865 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 SMTNP53814 917 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 ATXN3P54252 364 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 MRPS21P82921 87 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 PDIA5Q14554 519 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 KYAT1Q16773 422 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 SPDYCQ5MJ68 293 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 TTC38Q5R3I4 469 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 ALLCQ8N6M5 410 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 TXNDC5Q8NBS9 432 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 OR2I1PQ8NGU4 316 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 SH3RF2Q8TEC5 729 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 WHAMMQ8TF30 809 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 BICD1Q96G01 975 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 MYRFLQ96LU7 910 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 CAMK1GQ96NX5 476 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 PI4K2AQ9BTU6 479 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 CCDC86Q9H6F5 360 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 SLC6A14Q9UN76 642 aa13.81□□□□□ -0.2
RABGGTA-213ENST00000560127 MYO18BQ8IUG5 2567 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 MYH10P35580 1976 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 OGTO15294 1046 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 NFATC1O95644 943 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 TCF3P15923 654 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 CDC25AP30304 524 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 HOXD12P35452 270 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 GFPT1Q06210 699 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 NBR1Q14596 966 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 TMEM132DQ14C87 1099 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 DDR2Q16832 855 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 LMBRD2Q68DH5 695 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 DCP1BQ8IZD4 617 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 MINDY1Q8N5J2 469 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 ARL14EPQ8N8R7 260 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 IL17RCQ8NAC3 791 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 UXTQ9UBK9 157 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
RABGGTA-213ENST00000560127 C2orf78A6NCI8 922 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 SERPINF2P08697 491 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 SLC6A11P48066 632 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 TAF6P49848 677 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 LIG4P49917 911 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 ZXDBP98169 803 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 HNRNPDQ14103 355 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 CD302Q8IX05 232 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 DEFB119Q8N690 84 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 PNPLA1Q8N8W4 532 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 CEP76Q8TAP6 659 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 MDM1Q8TC05 714 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 ADAM32Q8TC27 787 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 KCNN1Q92952 543 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 CCSER1Q9C0I3 900 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 DNAAF2Q9NVR5 837 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 BCCIPQ9P287 314 aaKnown RBP eCLIP13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 DERAQ9Y315 318 aa13.79□□□□□ -0.2
RABGGTA-213ENST00000560127 MGAQ8IWI9 3026 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 A0A0B4J269 797 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 HNRNPDLO14979 420 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 SH3BP5O60239 455 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 ADAM23O75077 832 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 PIGRP01833 764 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 FTH1P19P0C7X4 201 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 CYP2F1P24903 491 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 TIE1P35590 1138 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 ANKRD1Q15327 319 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 IL17AQ16552 155 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 NFE2Q16621 373 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 EMC10Q5UCC4 262 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
RABGGTA-213ENST00000560127 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms