RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DLDP09622 509 aaKnown RBP4.63□□□□□ -1.67
SPG11-218ENST00000559754 LIPAP38571 399 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 PDE6CP51160 858 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 CLCN2P51788 898 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 EPHB1P54762 984 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 ZNF267Q14586 743 aaPredicted RBP4.63□□□□□ -1.67
SPG11-218ENST00000559754 PROSER3Q2NL68 480 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 MGAT5BQ3V5L5 792 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 TMEM119Q4V9L6 283 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 SLC44A4Q53GD3 710 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 LMBRD2Q68DH5 695 aaPredicted RBP4.63□□□□□ -1.67
SPG11-218ENST00000559754 MTHFD1LQ6UB35 978 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 ZNF783Q6ZMS7 281 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 SLC15A3Q8IY34 581 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 VGLL2Q8N8G2 317 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 PLBD2Q8NHP8 589 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 KBTBD7Q8WVZ9 684 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 JPH3Q8WXH2 748 aaPredicted RBP4.63□□□□□ -1.67
SPG11-218ENST00000559754 GLG1Q92896 1179 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 REPS1Q96D71 796 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 MRGPRX1Q96LB2 322 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 C1QTNF7Q9BXJ2 289 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 ZSCAN32Q9NX65 697 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 EID1Q9Y6B2 187 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 ZNF804BA4D1E1 1349 aa4.63□□□□□ -1.67
SPG11-218ENST00000559754 COL3A1P02461 1466 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 A0A1W2PPL8 197 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 A1L4Q6 167 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 ZNF213O14771 459 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 AKAP10O43572 662 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 UBXN7O94888 489 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 U2AF1L5P0DN76 240 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 ENGP17813 658 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 SLC11A2P49281 568 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 ZNF81P51508 661 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 UCP3P55916 312 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 TPTEP56180 551 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 TUBA4AP68366 448 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 GPSM2P81274 684 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 HOXA4Q00056 320 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 U2AF1Q01081 240 aaKnown RBP eCLIP4.62□□□□□ -1.67
SPG11-218ENST00000559754 KRT17Q04695 432 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 PAPD7Q5XG87 772 aaKnown RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 CCSAPQ6IQ19 270 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 ZNF782Q6ZMW2 699 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 PMM1Q92871 262 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 FSD1LQ9BXM9 530 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 NRIP3Q9NQ35 241 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 TRMT13Q9NUP7 481 aaKnown RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 RNF7Q9UBF6 113 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 ZNF70Q9UC06 446 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 CCNL1Q9UK58 526 aaPredicted RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 ADAMTS5Q9UNA0 930 aa4.62□□□□□ -1.67
SPG11-218ENST00000559754 THRAP3Q9Y2W1 955 aaKnown RBP4.62□□□□□ -1.67
SPG11-218ENST00000559754 WDR91A4D1P6 747 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 ERC2O15083 957 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 TJP3O95049 919 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 LATS1O95835 1130 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 RAB27AP51159 221 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 MYO1EQ12965 1108 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 EPHA10Q5JZY3 1008 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 PRAMEF17Q5VTA0 474 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 C1QL2Q7Z5L3 287 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 GAS2L3Q86XJ1 694 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 CELF5Q8N6W0 485 aaKnown RBP4.61□□□□□ -1.67
SPG11-218ENST00000559754 DNAJC5GQ8N7S2 189 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 ABHD11Q8NFV4 315 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 OR6B3Q8NGW1 331 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 SLC35G2Q8TBE7 412 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 OSCP1Q8WVF1 389 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 XAGE5Q8WWM1 108 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 P2RX7Q99572 595 aaKnown RBP4.61□□□□□ -1.67
SPG11-218ENST00000559754 MESP1Q9BRJ9 268 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 CDH19Q9H159 772 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 STAP2Q9UGK3 403 aa4.61□□□□□ -1.67
SPG11-218ENST00000559754 A0A087WWL8 130 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 SMIM22K7EJ46 135 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 KIF3BO15066 747 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 PHGDHO43175 533 aaKnown RBP4.6□□□□□ -1.67
SPG11-218ENST00000559754 PRKCBP05771 671 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 PRR35P0CG20 571 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 KELP23276 732 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 DGKEP52429 567 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 ARFIP2P53365 341 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 KRTAP10-11P60412 298 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 SP2Q02086 613 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 RAB32Q13637 225 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 ANO6Q4KMQ2 910 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 MTX3Q5HYI7 312 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 B3GNT9Q6UX72 402 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 NAPRTQ6XQN6 538 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 Q6ZWC4 215 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 NEK8Q86SG6 692 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 SLC15A4Q8N697 577 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 SOCS4Q8WXH5 440 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 R3HDM4Q96D70 268 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 DAZAP1Q96EP5 407 aaKnown RBP4.6□□□□□ -1.67
SPG11-218ENST00000559754 LRGUKQ96M69 825 aa4.6□□□□□ -1.67
SPG11-218ENST00000559754 TAAR9Q96RI9 348 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms