RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DR1Q01658 176 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 LRRC8DQ7L1W4 858 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 ZNF606Q8WXB4 792 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 SLC40A1Q9NP59 571 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 METTL5Q9NRN9 209 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 KRT82Q9NSB4 513 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 DDIT4Q9NX09 232 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 MYH13Q9UKX3 1938 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 F5H423 210 aaPredicted RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 PHBP35232 272 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 BCAT1P54687 386 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 SEPT6Q14141 434 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 ACAD10Q6JQN1 1059 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 ARHGEF19Q8IW93 802 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 OR5B17Q8NGF7 314 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 DNAJC17Q9NVM6 304 aaKnown RBP11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 TBK1Q9UHD2 729 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 SH3BP1Q9Y3L3 701 aa11.16□□□□□ -0.62
CARMIL3-202ENST00000559694 OPHN1O60890 802 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 LBX1P52954 281 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 SLC20A1Q8WUM9 679 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 MRPS31Q92665 395 aaKnown RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 KAT5Q92993 513 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 ARL8AQ96BM9 186 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 FBXL5Q9UKA1 691 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 SNX24Q9Y343 169 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 NOC2LQ9Y3T9 749 aaKnown RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 H0Y3Z8 333 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 PIGHQ14442 188 aaPredicted RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 ZNF558Q96NG5 402 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 THAP2Q9H0W7 228 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 RBM12Q9NTZ6 932 aaKnown RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 SCOCQ9UIL1 159 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 GTF3C4Q9UKN8 822 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 NRAPQ86VF7 1730 aa11.15□□□□□ -0.62
CARMIL3-202ENST00000559694 TMEM253P0C7T8 217 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 IGFBP4P22692 258 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 ARL2P36404 184 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 COG7P83436 770 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 AP1B1Q10567 949 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 FIGNQ5HY92 759 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 C17orf99Q6UX52 265 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 CFAP61Q8NHU2 1237 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 PTPN18Q99952 460 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX56Q9NY93 547 aaKnown RBP11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 UMODL1Q5DID0 1318 aa11.15□□□□□ -0.63
CARMIL3-202ENST00000559694 ENO4A6NNW6 628 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 POC1B-GALNT4F8VUJ3 575 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 M0QYT0 321 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 FAM107AO95990 144 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 GPD1P21695 349 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC1A1P43005 524 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 MAP7Q14244 749 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SMTNL2Q2TAL5 461 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 DNAAF5Q86Y56 855 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 RAB3IL1Q8TBN0 382 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 MORC4Q8TE76 937 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 C1orf54Q8WWF1 131 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 TRIB2Q92519 343 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 ZFP42Q96MM3 310 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 UNC93B1Q9H1C4 597 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SP110Q9HB58 689 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 TXLNGQ9NUQ3 528 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 TSPAN16Q9UKR8 245 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 IPPQ9Y573 584 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 A0A0B4J269 797 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 DFFAO00273 331 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 CPP00450 1065 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 KRT10P13645 584 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 COMTP21964 271 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 HEATR6Q6AI08 1181 aaKnown RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SLC24A5Q71RS6 500 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 CHSY1Q86X52 802 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 C7orf61Q8IZ16 206 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 FIBCD1Q8N539 461 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 OR2W6PQ8NHA6 318 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SKA2Q8WVK7 121 aaPredicted RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 FAF2Q96CS3 445 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 DDX50Q9BQ39 737 aaKnown RBP11.14□□□□□ -0.63
CARMIL3-202ENST00000559694 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms