RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CCNE1P24864 410 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LAMA1P25391 3075 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 TNNT3P45378 269 aaPredicted RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 LMAN1P49257 510 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 WNT7BP56706 349 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LILRA4P59901 499 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 YWHAHQ04917 246 aaPredicted RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 STRN3Q13033 797 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 SRSF5Q13243 272 aaKnown RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 CYP4A22Q5TCH4 519 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 GBP6Q6ZN66 633 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 Q6ZS52 159 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 TOGARAM2Q6ZUX3 1019 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 TMEM150AQ86TG1 271 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LRRTM3Q86VH5 581 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LEMD2Q8NC56 503 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 NEK11Q8NG66 645 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 DEPDC1BQ8WUY9 529 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ATRIPQ8WXE1 791 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 IRF7Q92985 503 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 KIF12Q96FN5 646 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ZFYVE19Q96K21 471 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 SENP8Q96LD8 212 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 RAB34Q9BZG1 259 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ASAH2Q9NR71 780 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 RBM12Q9NTZ6 932 aaKnown RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 LIMA1Q9UHB6 759 aaKnown RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 FBXO2Q9UK22 296 aaPredicted RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 TBX20Q9UMR3 447 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 UBQLN1Q9UMX0 589 aaKnown RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 RRP15Q9Y3B9 282 aaKnown RBP6.29□□□□□ -1.4
USP3-212ENST00000559276 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 F5P12259 2224 aa6.29□□□□□ -1.4
USP3-212ENST00000559276 ATXN2Q99700 1313 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 MYO16Q9Y6X6 1858 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 A0A1W2PQC6 194 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MYBPHLA2RUH7 354 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 OR6C75A6NL08 312 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MAN2B1O00754 1011 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 OGTO15294 1046 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CHADO15335 359 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 NCAM2O15394 837 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ACTN4O43707 911 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 SEC31AO94979 1220 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 PAPSS2O95340 614 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 CYP11A1P05108 521 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 BMP6P22004 513 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MARCKSP29966 332 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 ADSSP30520 456 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CTHP32929 405 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 PPP1R2P41236 205 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 SMTNP53814 917 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 GTF2BQ00403 316 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 TNK2Q07912 1038 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CUL4BQ13620 913 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CCINQ13939 588 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MYBPC2Q14324 1141 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MCM6Q14566 821 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CASP8Q14790 479 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ZC2HC1CQ53FD0 456 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 C9orf57Q5W0N0 161 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ARL6IP4Q66PJ3 421 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 OVOS1Q6IE37 1185 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 JADE1Q6IE81 842 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CCDC70Q6NSX1 233 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 PKN3Q6P5Z2 889 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 USP49Q70CQ1 688 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 APTXQ7Z2E3 356 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 DNAJB7Q7Z6W7 309 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 ARID3BQ8IVW6 561 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 PDILTQ8N807 584 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 KCNV2Q8TDN2 545 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 PSMG2Q969U7 264 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 LPIN3Q9BQK8 851 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 STRA6Q9BX79 667 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 FAM126AQ9BYI3 521 aaPredicted RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 HAUS4Q9H6D7 363 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ANKZF1Q9H8Y5 726 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 TMLHEQ9NVH6 421 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 ZNHIT6Q9NWK9 470 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 RMND1Q9NWS8 449 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 GTSE1Q9NYZ3 720 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 LARSQ9P2J5 1176 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 NCDNQ9UBB6 729 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms