RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 EDEM2Q9BV94 578 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 LINC00597Q9H2U6 94 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 ST6GALNAC4Q9H4F1 302 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 DUS2Q9NX74 493 aaKnown RBP9.29□□□□□ -0.92
CLPX-205ENST00000559218 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
CLPX-205ENST00000559218 TBC1D7Q9P0N9 293 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 EBF1Q9UH73 591 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 AGAP1Q9UPQ3 857 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 MYH11P35749 1972 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 ANK1P16157 1881 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 GREB1Q4ZG55 1949 aa9.29□□□□□ -0.92
CLPX-205ENST00000559218 CACNA1EQ15878 2313 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 TRAV19A0A0A6YYK7 116 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 LNP1A1A4G5 178 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 BCLAF3A2AJT9 711 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 C2orf78A6NCI8 922 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 C4orf47A7E2U8 309 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 IL18RAPO95256 599 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 CAVIN2O95810 425 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 CKMP06732 381 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 AMPD2Q01433 879 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 POU5F1Q01860 360 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 FAM160A1Q05DH4 1040 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 USP4Q13107 963 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 PSMD2Q13200 908 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ELF2Q15723 593 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 FBXO43Q4G163 708 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 INTS6LQ5JSJ4 861 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 SH3RF2Q8TEC5 729 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 LARP4BQ92615 738 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 CD101Q93033 1021 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ATP2A3Q93084 1043 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 TRMT2BQ96GJ1 504 aaKnown RBP9.28□□□□□ -0.92
CLPX-205ENST00000559218 EPSTI1Q96J88 318 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 MYRFLQ96LU7 910 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ZNF560Q96MR9 790 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ACBD6Q9BR61 282 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 STRA6Q9BX79 667 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 TPSD1Q9BZJ3 242 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 SIX4Q9UIU6 781 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 KIF3AQ9Y496 699 aa9.28□□□□□ -0.92
CLPX-205ENST00000559218 GOLGA8IPA6NC78 632 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 MYMKA6NI61 221 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 GOLGA8JA6NMD2 632 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 PATE3B3GLJ2 98 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 HUS1O60921 280 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 ATP2C2O75185 946 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 RHOBTB1O94844 696 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 USP17L7P0C7H9 530 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 C1QTNF9P0C862 333 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 SPINK2P20155 84 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 BCKDHBP21953 392 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 GBP1P32455 592 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 ABCD1P33897 745 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 DDIT3P35638 169 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 LONP1P36776 959 aaKnown RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 PNPLA4P41247 253 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 IFNAR2P48551 515 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 NOVA1P51513 510 aaKnown RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 CASP5P51878 434 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 DGKEP52429 567 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 SEC13P55735 322 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 ZXDBP98169 803 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 SF3A1Q15459 793 aaKnown RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 GAB4Q2WGN9 574 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 C2orf27AQ580R0 203 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 NT5DC4Q86YG4 428 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 SFTPA1Q8IWL2 248 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 BRSK2Q8IWQ3 736 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 SCN4BQ8IWT1 228 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 PLPP6Q8IY26 295 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 TMEM86AQ8N2M4 240 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 CSGALNACT2Q8N6G5 542 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 KRI1Q8N9T8 703 aaKnown RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 TSTD1Q8NFU3 115 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 USP33Q8TEY7 942 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 ACDQ96AP0 544 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 FGFBP2Q9BYJ0 223 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 TMEM206Q9H813 350 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 MRPL44Q9H9J2 332 aaKnown RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 UXTQ9UBK9 157 aaPredicted RBP9.27□□□□□ -0.93
CLPX-205ENST00000559218 SNX9Q9Y5X1 595 aa9.27□□□□□ -0.93
CLPX-205ENST00000559218 ABCA7Q8IZY2 2146 aa9.26□□□□□ -0.93
CLPX-205ENST00000559218 GON4LQ3T8J9 2241 aa9.26□□□□□ -0.93
CLPX-205ENST00000559218 K7EQS6 105 aa9.26□□□□□ -0.93
CLPX-205ENST00000559218 GABRDO14764 452 aa9.26□□□□□ -0.93
CLPX-205ENST00000559218 SCAMP3O14828 347 aaKnown RBP9.26□□□□□ -0.93
CLPX-205ENST00000559218 TOP3BO95985 862 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms