RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 EPB41P11171 864 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 KRT13P13646 458 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 PCSK1P29120 753 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 RAD23BP54727 409 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 EPHB3P54753 998 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 SMARCB1Q12824 385 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 GPRIN1Q7Z2K8 1008 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 ARHGEF19Q8IW93 802 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 FBXL13Q8NEE6 735 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 TAF4BQ92750 862 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 NXPE3Q969Y0 559 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 KREMEN1Q96MU8 473 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 TRPV4Q9HBA0 871 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 GDE1Q9NZC3 331 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 RWDD2AQ9UIY3 292 aa13.47□□□□□ -0.25
RABGGTA-207ENST00000558936 MYO16Q9Y6X6 1858 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 MYOFQ9NZM1 2061 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 C2orf78A6NCI8 922 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 OTOL1A6NHN0 477 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 GLULP15104 373 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 CYP27A1Q02318 531 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 FZD5Q13467 585 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 GRM2Q14416 872 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TXNDC8Q6A555 127 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 PHLDB3Q6NSJ2 640 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 C11orf57Q6ZUT1 292 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 FAM35AQ86V20 835 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 ARID3BQ8IVW6 561 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 ZSCAN18Q8TBC5 510 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 PBXIP1Q96AQ6 731 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TRMT2BQ96GJ1 504 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TSG101Q99816 390 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 NIF3L1Q9GZT8 377 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 SNX25Q9H3E2 840 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 CSNK1G1Q9HCP0 422 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 MAGEC2Q9UBF1 373 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 ASB3Q9Y575 518 aa13.46□□□□□ -0.25
RABGGTA-207ENST00000558936 TULP2O00295 520 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 ECI2O75521 394 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SRFP11831 508 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 CD58P19256 250 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 KCNH2Q12809 1159 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 LRMPQ12912 555 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 MIIPQ5JXC2 388 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 PPP1R26Q5T8A7 1209 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 CYP4A22Q5TCH4 519 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 TCERG1LQ5VWI1 586 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 IQCEQ6IPM2 695 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 ELMOD1Q8N336 334 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SLC2A14Q8TDB8 520 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 WBP2Q969T9 261 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SPATA17Q96L03 361 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 C8orf48Q96LL4 319 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 RNF38Q9H0F5 515 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 ATXN3LQ9H3M9 355 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 CISHQ9NSE2 258 aa13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 MAGED2Q9UNF1 606 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-207ENST00000558936 F5P12259 2224 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 FAM92AA1XBS5 289 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 HEPACAM2A8MVW5 462 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 ZNF197O14709 1029 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 KCNMA1Q12791 1236 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 GPR158Q5T848 1215 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 CLEC20AQ6ZU45 233 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 UNC93AQ86WB7 457 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 TTC30AQ86WT1 665 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
RABGGTA-207ENST00000558936 MLKLQ8NB16 471 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms