RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 ID4P47928 161 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 LHX1P48742 406 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 CASP4P49662 377 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PSMC1P62191 440 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SNRPFP62306 86 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 DLG4P78352 724 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MYL7Q01449 175 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 CYP24A1Q07973 514 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF268Q14587 947 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PON2Q15165 354 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF77Q15935 545 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 DUOXA2Q1HG44 320 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 FOXD4L6Q3SYB3 417 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 TMEM196Q5HYL7 178 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 C1orf220Q5T0J3 134 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 TRIM68Q6AZZ1 485 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ZC3H14Q6PJT7 736 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 FOXD4L3Q6VB84 417 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PAQR9Q6ZVX9 377 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 KIAA2013Q8IYS2 634 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ADGRF2Q8IZF7 708 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SPEM1Q8N4L4 309 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MAB21L3Q8N8X9 362 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 RDH13Q8NBN7 331 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MYCBPAPQ8TBZ2 947 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 FAM200AQ8TCP9 573 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 CSGALNACT1Q8TDX6 532 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MYLPFQ96A32 169 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ELMO3Q96BJ8 720 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PAGE5Q96GU1 130 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MSANTD3Q96H12 275 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PCED1BQ96HM7 432 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 FUBP3Q96I24 572 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SPATA17Q96L03 361 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 CGRRF1Q99675 332 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 TTLL2Q9BWV7 592 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 FAM126AQ9BYI3 521 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 LRRC27Q9C0I9 530 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SDCBP2Q9H190 292 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 KCTD10Q9H3F6 313 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 DPEP3Q9H4B8 488 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SLITRK6Q9H5Y7 841 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 C8orf33Q9H7E9 229 aaPredicted RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MAGEF1Q9HAY2 307 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SLC39A2Q9NP94 309 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 GKN1Q9NS71 199 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 TDP1Q9NUW8 608 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 SERTAD1Q9UHV2 236 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 WDFY3Q8IZQ1 3526 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 NCOR2Q9Y618 2525 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 LRRIQ3A6PVS8 624 aaPredicted RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 CHURC1-FNTBB4DL54 471 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TRDMT1O14717 391 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TNFRSF10BO14763 440 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 FAM163BP0C2L3 166 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TMEM191BP0C7N4 346 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 SLFN14P0C7P3 912 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 PRR29P0C7W0 189 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 CSH1P0DML2 217 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 CSH2P0DML3 217 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ARSAP15289 507 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TCF3P15923 654 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 PFKFB1P16118 471 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 DDX6P26196 483 aaKnown RBP eCLIP5.93□□□□□ -1.461e-5■■■□□ 17.8
SMAD3-209ENST00000558894 HOXA6P31267 233 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 GJA4P35212 333 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 AFMP43652 599 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 CXCL12P48061 93 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 FNTBP49356 437 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 GALK1P51570 392 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 CCR3P51677 355 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 KPNA1P52294 538 aaPredicted RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 MYL6P60660 151 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 RPL10AP62906 217 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 NOP14P78316 857 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ASIC1P78348 528 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 AMPD3Q01432 767 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TSPY1Q01534 308 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 USP4Q13107 963 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 SRSF5Q13243 272 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 RUNX3Q13761 415 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 VEPH1Q14D04 833 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 SURF1Q15526 300 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 KNOP1Q1ED39 458 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 EML3Q32P44 896 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ITPRIPL2Q3MIP1 535 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ARHGAP15Q53QZ3 475 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 DGKKQ5KSL6 1271 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 TDRD10Q5VZ19 366 aaKnown RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ATL3Q6DD88 541 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 C1orf228Q6PIY5 440 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 VSTM1Q6UX27 236 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 NELFCDQ8IXH7 590 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 YAF2Q8IY57 180 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ARL14EPQ8N8R7 260 aaPredicted RBP5.93□□□□□ -1.46
SMAD3-209ENST00000558894 XXYLT1Q8NBI6 393 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 KCNG4Q8TDN1 519 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
SMAD3-209ENST00000558894 ATRIPQ8WXE1 791 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms