RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SPAG17Q6Q759 2223 aa18.18■□□□□ 0.5
LRRC28-210ENST00000558879 PTPRZ1P23471 2315 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-210ENST00000558879 MAPK13O15264 365 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 LAMTOR5O43504 91 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 VNN1O95497 513 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 CTHP32929 405 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 DLG4P78352 724 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 TRPC3Q13507 836 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 ZNF268Q14587 947 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-210ENST00000558879 ZACNQ401N2 412 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 WDR44Q5JSH3 913 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 TXNDC8Q6A555 127 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 ZC3H14Q6PJT7 736 aaKnown RBP18.17■□□□□ 0.5
LRRC28-210ENST00000558879 MON1AQ86VX9 555 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 MAB21L3Q8N8X9 362 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 MYCBPAPQ8TBZ2 947 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 CSGALNACT1Q8TDX6 532 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 MRPS31Q92665 395 aaKnown RBP18.17■□□□□ 0.5
LRRC28-210ENST00000558879 NELL1Q92832 810 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 DPEP3Q9H4B8 488 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
LRRC28-210ENST00000558879 CCL26Q9Y258 94 aa18.17■□□□□ 0.5
LRRC28-210ENST00000558879 ZNF202O95125 648 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 PDGFRBP09619 1106 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 CHRNB1P11230 501 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 BDNFP23560 247 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 CCNE1P24864 410 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 AVPR1AP37288 418 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 SOX9P48436 509 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 USP4Q13107 963 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 ZCWPW2Q504Y3 356 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 MDH1BQ5I0G3 518 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 C1orf220Q5T0J3 134 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 TXNDC11Q6PKC3 985 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
LRRC28-210ENST00000558879 GUF1Q8N442 669 aaKnown RBP18.16■□□□□ 0.5
LRRC28-210ENST00000558879 OR6B3Q8NGW1 331 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 TMC2Q8TDI7 906 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 SMYD3Q9H7B4 428 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 TDP1Q9NUW8 608 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 TMEM30AQ9NV96 361 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 GTSE1Q9NYZ3 720 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 R4GN57 208 aa18.16■□□□□ 0.5
LRRC28-210ENST00000558879 RALGAPA1Q6GYQ0 2036 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 SPECC1L-ADORA2AF8WAN1 911 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 TRIM66O15016 1216 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 CALUO43852 315 aaPredicted RBP18.15■□□□□ 0.5
LRRC28-210ENST00000558879 KIF20AO95235 890 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 GNL1P36915 607 aaPredicted RBP18.15■□□□□ 0.5
LRRC28-210ENST00000558879 CYP27A1Q02318 531 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 MTAPQ13126 283 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 BIRC3Q13489 604 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 NCOA4Q13772 614 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 ZNF699Q32M78 642 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 MAMSTRQ6ZN01 415 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 B3GALNT2Q8NCR0 500 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 CCDC47Q96A33 483 aaKnown RBP18.15■□□□□ 0.5
LRRC28-210ENST00000558879 FAM83CQ9BQN1 747 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 TTLL2Q9BWV7 592 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 SNX25Q9H3E2 840 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 HPS4Q9NQG7 708 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 ZNF292O60281 2723 aa18.15■□□□□ 0.5
LRRC28-210ENST00000558879 PHACTR2O75167 634 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 TDGF1P13385 188 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 TCF3P15923 654 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 PTPN1P18031 435 aaKnown RBP18.14■□□□□ 0.49
LRRC28-210ENST00000558879 NR2F2P24468 414 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 USP46P62068 366 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 NOP14P78316 857 aaKnown RBP18.14■□□□□ 0.49
LRRC28-210ENST00000558879 TNK2Q07912 1038 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 BECN1Q14457 450 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 ZNF77Q15935 545 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 ZNF667Q5HYK9 610 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 DENND5BQ6ZUT9 1274 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 ZBTB44Q8NCP5 570 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 CHFRQ96EP1 664 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 SLC22A12Q96S37 553 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 ELOVL4Q9GZR5 314 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 SDCBP2Q9H190 292 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 GCNT4Q9P109 453 aa18.14■□□□□ 0.49
LRRC28-210ENST00000558879 NXF1Q9UBU9 619 aaKnown RBP18.14■□□□□ 0.49
LRRC28-210ENST00000558879 EP300Q09472 2414 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-210ENST00000558879 A8MXQ7 604 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 F8VP50 259 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 IKBKBO14920 756 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 GRIK1P39086 918 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-210ENST00000558879 CACNA2D1P54289 1103 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 MCCD1P59942 119 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-210ENST00000558879 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 ENPEPQ07075 957 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 GAS6Q14393 721 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 ITPRIPL2Q3MIP1 535 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 CEP135Q66GS9 1140 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 SV2AQ7L0J3 742 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
LRRC28-210ENST00000558879 ZNF518BQ9C0D4 1074 aa18.13■□□□□ 0.49
LRRC28-210ENST00000558879 LMAN1LQ9HAT1 526 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms