RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 FGF13Q92913 245 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 ACSF2Q96CM8 615 aaPredicted RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 CYFIP2Q96F07 1278 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 TMEM176AQ96HP8 235 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 KREMEN1Q96MU8 473 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 VPS16Q9H269 839 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 ASAH2Q9NR71 780 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 FAM49BQ9NUQ9 324 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 OBSL1O75147 1896 aa13.27□□□□□ -0.28
LRRC28-206ENST00000558471 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 F8VP50 259 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 ZNF197O14709 1029 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 LAMP2P13473 410 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 YWHAEP62258 255 aaKnown RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 GCNT1Q02742 428 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 IQCB1Q15051 598 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 TAF12Q16514 161 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 GJB7Q6PEY0 223 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 RNF135Q8IUD6 432 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 ING5Q8WYH8 240 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 KCNK16Q96T55 309 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 UBE2TQ9NPD8 197 aaPredicted RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 LIMD1Q9UGP4 676 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.29
LRRC28-206ENST00000558471 CDH7Q9ULB5 785 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
LRRC28-206ENST00000558471 A0A1W2PRU2 124 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SMTNL1A8MU46 457 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 RNF225M0QZC1 329 aaPredicted RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 TRIM66O15016 1216 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 BEST1O76090 585 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 NOL4O94818 638 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 MICAL2O94851 1124 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 CSH1P0DML2 217 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 CSH2P0DML3 217 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 ATP1A3P13637 1013 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 CEBPBP17676 345 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 TRIM21P19474 475 aaKnown RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 ANXA13P27216 316 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 GABRR2P28476 465 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 ADORA2BP29275 332 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 COPB1P53618 953 aaKnown RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 PPP1R26Q5T8A7 1209 aaPredicted RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 TMEM270Q6UE05 265 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 GAREM2Q75VX8 874 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 NPAS3Q8IXF0 933 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SHKBP1Q8TBC3 707 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 TTC28Q96AY4 2481 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 MCRS1Q96EZ8 462 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SMARCD1Q96GM5 515 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SMOQ99835 787 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 DNAI2Q9GZS0 605 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 ANAPC1Q9H1A4 1944 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 CBX8Q9HC52 389 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 EPS15L1Q9UBC2 864 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 APEX2Q9UBZ4 518 aa13.26□□□□□ -0.29
LRRC28-206ENST00000558471 MAGED2Q9UNF1 606 aaPredicted RBP13.26□□□□□ -0.29
LRRC28-206ENST00000558471 AP1G2O75843 785 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 F11P03951 625 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 USP46P62068 366 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 TEAD2Q15562 447 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 DENND5BQ6ZUT9 1274 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 TMEM150AQ86TG1 271 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 ZMIZ2Q8NF64 920 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 ST13P5Q8NFI4 369 aaPredicted RBP13.25□□□□□ -0.29
LRRC28-206ENST00000558471 KHSRPQ92945 711 aaKnown RBP eCLIP13.25□□□□□ -0.29
LRRC28-206ENST00000558471 MYRFLQ96LU7 910 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 CEP295NLQ96MC4 621 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 ZSWIM3Q96MP5 696 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 ATXN3LQ9H3M9 355 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 CSNK1G1Q9HCP0 422 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 CNTN6Q9UQ52 1028 aa13.25□□□□□ -0.29
LRRC28-206ENST00000558471 ZFP37Q9Y6Q3 630 aaPredicted RBP13.25□□□□□ -0.29
LRRC28-206ENST00000558471 BECN2A8MW95 431 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 DLL1O00548 723 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 FGF19O95750 216 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 CALCAP01258 141 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ASGR2P07307 311 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 TPM2P07951 284 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 MFAP3P55082 362 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 MAP3K7CLP57077 242 aa13.24□□□□□ -0.29
LRRC28-206ENST00000558471 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms