RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 SLC10A4Q96EP9 437 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 PCDH9Q9HC56 1237 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 LRRC4CQ9HCJ2 640 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 ZNF536O15090 1300 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 MYH11P35749 1972 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 CCND1P24385 295 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 GOLGA7BQ2TAP0 167 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 PID1Q7Z2X4 250 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 SPDL1Q96EA4 605 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 YIPF3Q9GZM5 350 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 A0A1W2PPM1 405 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 PYGBP11216 843 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 MIPP30301 263 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 CYP4X1Q8N118 509 aa16.16■□□□□ 0.18
AP4E1-202ENST00000558439 C12orf65Q9H3J6 166 aaKnown RBP16.16■□□□□ 0.18
AP4E1-202ENST00000558439 SRRM3A6NNA2 597 aaPredicted RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 B4GALT5O43286 388 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 PGM1P36871 562 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 GARSP41250 739 aaKnown RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 NPNTQ6UXI9 565 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 CCT6BQ92526 530 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 CLMNQ96JQ2 1002 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 PPP1R36Q96LQ0 422 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 SHCBP1LQ9BZQ2 653 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 ITKQ08881 620 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 UBAP2Q5T6F2 1119 aaKnown RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 DPY19L2Q6NUT2 758 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 PDZD4Q76G19 769 aaPredicted RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 LRRC6Q86X45 466 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 AGGF1Q8N302 714 aaeCLIP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 OSBPL1AQ9BXW6 950 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 GGA2Q9UJY4 613 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 LRP5O75197 1615 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 CFLARO15519 480 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 OPHN1O60890 802 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 ZWINTO95229 277 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 KCNA2P16389 499 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 TYK2P29597 1187 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
AP4E1-202ENST00000558439 C1orf146Q5VVC0 180 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 METTL7BQ6UX53 244 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 TUBB6Q9BUF5 446 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 SPATC1LQ9H0A9 340 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 MYLK2Q9H1R3 596 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 STOML1Q9UBI4 398 aa16.15■□□□□ 0.18
AP4E1-202ENST00000558439 ATP9BO43861 1147 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 HBP1O60381 514 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 SMIM24O75264 130 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 C4BPAP04003 597 aaKnown RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 BGNP21810 368 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 MAP7D1Q3KQU3 841 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 BEST2Q8NFU1 509 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 JOSD2Q8TAC2 188 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 PRMT7Q9NVM4 692 aaPredicted RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 KLK14Q9P0G3 267 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 NPTXRO95502 500 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 LSM8O95777 96 aaKnown RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 EEF1DP3Q658K8 133 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ZNF518BQ9C0D4 1074 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ST6GALNAC4Q9H4F1 302 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ERAP1Q9NZ08 941 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 SHOC2Q9UQ13 582 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 B2RBV5 119 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 HUS1O60921 280 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 SNRPAP09012 282 aaKnown RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 TCF4P15884 667 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 SLC39A4Q6P5W5 647 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 AGAP11Q8TF27 550 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ALKBH8Q96BT7 664 aaKnown RBP16.14■□□□□ 0.17
AP4E1-202ENST00000558439 PGBD4Q96DM1 585 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 TMEM176AQ96HP8 235 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 PAK5Q9P286 719 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
AP4E1-202ENST00000558439 TGFB2P61812 414 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 CHI3L2Q15782 390 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 KIZQ2M2Z5 673 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 TWF2Q6IBS0 349 aaKnown RBP16.13■□□□□ 0.17
AP4E1-202ENST00000558439 FAM172AQ8WUF8 416 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 CEP41Q9BYV8 373 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 APOBEC2Q9Y235 224 aaKnown RBP16.13■□□□□ 0.17
AP4E1-202ENST00000558439 NOD1Q9Y239 953 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 SPATA31C2B4DYI2 1134 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 KBTBD13C9JR72 458 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 M0QZ92 97 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 DNAJC8O75937 253 aaPredicted RBP16.13■□□□□ 0.17
AP4E1-202ENST00000558439 SKIP12755 728 aa16.13■□□□□ 0.17
AP4E1-202ENST00000558439 STIP1P31948 543 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms