RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■■□□□ 12
SMAD3-205ENST00000558428 MCRS1Q96EZ8 462 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 GCNAQ96QF7 691 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 FAM124BQ9H5Z6 455 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-205ENST00000558428 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
SMAD3-205ENST00000558428 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SYCE3A1L190 88 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
SMAD3-205ENST00000558428 AP1G2O75843 785 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 MICAL2O94851 1124 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
SMAD3-205ENST00000558428 ADORA2BP29275 332 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 CDC25CP30307 473 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 TEAD2Q15562 447 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 EXOC3L4Q17RC7 722 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 MIIPQ5JXC2 388 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 GAREM2Q75VX8 874 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 RRAGAQ7L523 313 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 KAT5Q92993 513 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SPATA17Q96L03 361 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
SMAD3-205ENST00000558428 NDST4Q9H3R1 872 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 SLITRK6Q9H5Y7 841 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 TMEM30AQ9NV96 361 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
SMAD3-205ENST00000558428 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-205ENST00000558428 ANAPC1Q9H1A4 1944 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 DCXO43602 365 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 NOL4O94818 638 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 TPM2P07951 284 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 SLC9A1P19634 815 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 RAD23BP54727 409 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 CYP4F8P98187 520 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 GCNT1Q02742 428 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 ARHGAP15Q53QZ3 475 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 PPP1R26Q5T8A7 1209 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-205ENST00000558428 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 POTEHQ6S545 545 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 UBR7Q8N806 425 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 RSAD2Q8WXG1 361 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
SMAD3-205ENST00000558428 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 KCNK12Q9HB15 430 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 IL21Q9HBE4 155 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-205ENST00000558428 IGSF9Q9P2J2 1179 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
SMAD3-205ENST00000558428 F11P03951 625 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 ALADP13716 330 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-205ENST00000558428 HTR4Q13639 388 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 NCAPHQ15003 741 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 KRT31Q15323 416 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 STXBP5Q5T5C0 1151 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 PARM1Q6UWI2 310 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 ANKRD20A12PQ8NF67 263 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 FGF14Q92915 247 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 NXPE3Q969Y0 559 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 TRMT2BQ96GJ1 504 aaKnown RBP13.1□□□□□ -0.31
SMAD3-205ENST00000558428 MYRFLQ96LU7 910 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 SMOQ99835 787 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 VPS16Q9H269 839 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 UBE2TQ9NPD8 197 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-205ENST00000558428 SORCS3Q9UPU3 1222 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 PATJQ8NI35 1801 aa13.1□□□□□ -0.31
SMAD3-205ENST00000558428 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms