RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SHDQ96IW2 340 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 C8orf48Q96LL4 319 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 ASB16Q96NS5 453 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 BCO2Q9BYV7 579 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 SLITRK6Q9H5Y7 841 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 TASP1Q9H6P5 420 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 MMRN2Q9H8L6 949 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 OBP2AQ9NY56 170 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 FBXL21Q9UKT6 434 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 NUMBLQ9Y6R0 609 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CACNA1GO43497 2377 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 DPYSL4O14531 572 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 MOSPD3O75425 235 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 SOAT2O75908 522 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 NOL4O94818 638 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 HMGA1P17096 107 aaKnown RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 CEBPBP17676 345 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 PFKLP17858 780 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 PSMC3P17980 439 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 ERCC5P28715 1186 aaPredicted RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 PDE6CP51160 858 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 CLCN5P51795 746 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 TEAD2Q15562 447 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 TPD52L1Q16890 204 aaPredicted RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 MDH1BQ5I0G3 518 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 FAM78AQ5JUQ0 283 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 TANGO2Q6ICL3 276 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 DENND5BQ6ZUT9 1274 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 MFSD6LQ8IWD5 586 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 FBXL6Q8N531 539 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 ZSCAN18Q8TBC5 510 aaPredicted RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 DEPDC1BQ8WUY9 529 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 RSAD2Q8WXG1 361 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 FGF14Q92915 247 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 IRF7Q92985 503 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 MYLPFQ96A32 169 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 ASIC4Q96FT7 647 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 MFSD1Q9H3U5 465 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 COMMD8Q9NX08 183 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 MAGED2Q9UNF1 606 aaPredicted RBP9.02□□□□□ -0.97
TPM1-213ENST00000558400 CTNND2Q9UQB3 1225 aa9.02□□□□□ -0.97
TPM1-213ENST00000558400 GVINP1Q7Z2Y8 2422 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 SLC38A8A6NNN8 435 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 RTN3O95197 1032 aaPredicted RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 MBD3O95983 291 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 F11P03951 625 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 TBXAS1P24557 533 aaPredicted RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 AVPR1AP37288 418 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 ASPAP45381 313 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 FMO5P49326 533 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 NDST1P52848 882 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 MLLT6P55198 1093 aaPredicted RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 STX17P56962 302 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 NLRP12P59046 1061 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 GPC5P78333 572 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 GPR158Q5T848 1215 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 SPOPLQ6IQ16 392 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 ACOT1Q86TX2 421 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 MON1AQ86VX9 555 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 ARID3BQ8IVW6 561 aaPredicted RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 FAM114A1Q8IWE2 563 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 YAF2Q8IY57 180 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 CMTM8Q8IZV2 173 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 NUP93Q8N1F7 819 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 CYFIP2Q96F07 1278 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 SMARCD1Q96GM5 515 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 ZSWIM3Q96MP5 696 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 SLITRK1Q96PX8 696 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 NELL2Q99435 816 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 HNRNPABQ99729 332 aaKnown RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 MED10Q9BTT4 135 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 B3GNT5Q9BYG0 378 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 IRF2BPLQ9H1B7 796 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 IL21Q9HBE4 155 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 APOBEC3GQ9HC16 384 aaKnown RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 ZNF334Q9HCZ1 680 aaPredicted RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 THG1LQ9NWX6 298 aaKnown RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 KIAA1257Q9ULG3 409 aa9.01□□□□□ -0.97
TPM1-213ENST00000558400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
TPM1-213ENST00000558400 TPRP12270 2363 aaKnown RBP9.01□□□□□ -0.97
TPM1-213ENST00000558400 EPG5Q9HCE0 2579 aa9□□□□□ -0.97
TPM1-213ENST00000558400 PROB1E7EW31 1015 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms