RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
USP3-206ENST00000558157 NR2E3Q9Y5X4 410 aa11.41□□□□□ -0.58
USP3-206ENST00000558157 UBIAD1Q9Y5Z9 338 aa11.41□□□□□ -0.58
USP3-206ENST00000558157 PLXNB2O15031 1838 aa11.41□□□□□ -0.58
USP3-206ENST00000558157 EXOC1LA0A1B0GW35 172 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 FOXO6A8MYZ6 492 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 BUD23O43709 281 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 TM7SF2O76062 418 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 ATP5BP06576 529 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 CDK4P11802 303 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 HARSP12081 509 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 PORP16435 677 aaPredicted RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 CA4P22748 312 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 CCND2P30279 289 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 OXCT1P55809 520 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 GPC5P78333 572 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 PLCB3Q01970 1234 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SPIRE1Q08AE8 756 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 TMEM62Q0P6H9 643 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 BTG3Q14201 252 aaPredicted RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 KIF22Q14807 665 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 KYAT3Q6YP21 454 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SATL1Q86VE3 508 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 NMD3Q96D46 503 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 WDR11Q9BZH6 1224 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 PORCNQ9H237 461 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 VPS11Q9H270 941 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 AJAP1Q9UKB5 411 aaPredicted RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 VAV3Q9UKW4 847 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 TMED5Q9Y3A6 229 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 ASTN1O14525 1302 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 MANSC4A6NHS7 340 aaPredicted RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 VILLO15195 856 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 TM9SF1O15321 606 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SPAG7O75391 227 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 TOMM70O94826 608 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 NR3C2P08235 984 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 COMTP21964 271 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 GTF2H1P32780 548 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 GRIA2P42262 883 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 KCNJ1P48048 391 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 ARFIP2P53365 341 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 EMP3P54852 163 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 PLOD1Q02809 727 aaPredicted RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 ZBTB16Q05516 673 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SGO2Q562F6 1265 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 DUS1LQ6P1R4 473 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 NOP9Q86U38 636 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 SCUBE1Q8IWY4 988 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 FNDC8Q8TC99 324 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 NSUN6Q8TEA1 469 aaKnown RBP11.4□□□□□ -0.58
USP3-206ENST00000558157 FAM161BQ96MY7 647 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 ZNF577Q9BSK1 485 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 BRD8Q9H0E9 1235 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 EBF3Q9H4W6 596 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 CLIC5Q9NZA1 410 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 SLC24A2Q9UI40 661 aa11.4□□□□□ -0.58
USP3-206ENST00000558157 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 FAM155AB1AL88 458 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 CHRNB2P17787 502 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 AMPD1P23109 780 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 RPA3P35244 121 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 DRAP1Q14919 205 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 TBCCQ15814 346 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 BMT2Q1RMZ1 405 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 ANKRD20A4Q4UJ75 823 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 DCAF17Q5H9S7 520 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 NIPA1Q7RTP0 329 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 CCDC89Q8N998 374 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 GPRC5AQ8NFJ5 357 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 FAM172AQ8WUF8 416 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 ALKBH8Q96BT7 664 aaKnown RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 AGAP3Q96P47 875 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 FGFBP2Q9BYJ0 223 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 FETUBQ9UGM5 382 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 PEX1O43933 1283 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 PSMD10O75832 226 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 VCLP18206 1134 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 MARCKSL1P49006 195 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 GEMIN4P57678 1058 aaKnown RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 MTMR1Q13613 665 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 RIPOR1Q6ZS17 1223 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 C3orf62Q6ZUJ4 267 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 ABTB1Q969K4 478 aaPredicted RBP11.39□□□□□ -0.59
USP3-206ENST00000558157 MMP19Q99542 508 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 KLHL4Q9C0H6 718 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 C1orf21Q9H246 121 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms