RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SF3A2Q15428 464 aaKnown RBP17.08■□□□□ 0.32
SCFD1-224ENST00000557713 EML3Q32P44 896 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 PLA2G2CQ5R387 149 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 C4orf50Q6ZRC1 276 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 ARL14EPQ8N8R7 260 aaPredicted RBP17.08■□□□□ 0.32
SCFD1-224ENST00000557713 FSIP1Q8NA03 581 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 GLIS3Q8NEA6 775 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 CD101Q93033 1021 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 EXOC4Q96A65 974 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 SPATA17Q96L03 361 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 LINC00597Q9H2U6 94 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 CRTAC1Q9NQ79 661 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
SCFD1-224ENST00000557713 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 MTMR6Q9Y217 621 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 TM4SF5O14894 197 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 CKMP06732 381 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 TCF3P15923 654 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 HDCP19113 662 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 IFNAR2P48551 515 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 SURF1Q15526 300 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 CCDC6Q16204 474 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 DUOXA2Q1HG44 320 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 VSTM1Q6UX27 236 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 SYT13Q7L8C5 426 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 CBWD2Q8IUF1 395 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 PDILTQ8N807 584 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 SH3RF2Q8TEC5 729 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 ATP2A3Q93084 1043 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 CEP295NLQ96MC4 621 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 SYT15Q9BQS2 421 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 RXFP3Q9NSD7 469 aa17.07■□□□□ 0.32
SCFD1-224ENST00000557713 ZNF638Q14966 1978 aaKnown RBP17.07■□□□□ 0.32
SCFD1-224ENST00000557713 RALGAPA1Q6GYQ0 2036 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 TNNC2P02585 160 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 WARSP23381 471 aaKnown RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 PSMC1P62191 440 aaKnown RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 ZXDBP98169 803 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 E2F4Q16254 413 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 PLK5Q496M5 336 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 RPLP0P6Q8NHW5 317 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 MYLPFQ96A32 169 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 HHIPQ96QV1 700 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 DUSP15Q9H1R2 295 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 HSPBP1Q9NZL4 362 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 EBF1Q9UH73 591 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
SCFD1-224ENST00000557713 PCDHGA5Q9Y5G8 931 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 SPTBN2O15020 2390 aa17.06■□□□□ 0.32
SCFD1-224ENST00000557713 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 PDGFRBP09619 1106 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 BDNFP23560 247 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 USP46P62068 366 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 NR1H3Q13133 447 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 MAPRE1Q15691 268 aaKnown RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 STXBP4Q6ZWJ1 553 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 WDR49Q8IV35 697 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 ZNF507Q8TCN5 953 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 INTS4Q96HW7 963 aaKnown RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 KIAA1586Q9HCI6 787 aa17.05■□□□□ 0.32
SCFD1-224ENST00000557713 KMT2BQ9UMN6 2715 aaPredicted RBP17.05■□□□□ 0.32
SCFD1-224ENST00000557713 EML5Q05BV3 1969 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 GREB1Q4ZG55 1949 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 ANAPC1Q9H1A4 1944 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
SCFD1-224ENST00000557713 PFKLP17858 780 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 GRIK1P39086 918 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 DMC1Q14565 340 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 KCNB1Q14721 858 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 IL31Q6EBC2 164 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 DENND5BQ6ZUT9 1274 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 ACDQ96AP0 544 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 PCED1BQ96HM7 432 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 TTLL2Q9BWV7 592 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 TRPM5Q9NZQ8 1165 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
SCFD1-224ENST00000557713 ZNF840PA6NDX5 716 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 K7EQS6 105 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 LEFTY2O00292 366 aa17.03■□□□□ 0.32
SCFD1-224ENST00000557713 DCLK1O15075 740 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms