RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 UXTQ9UBK9 157 aaPredicted RBP13.31□□□□□ -0.28
SLIRP-211ENST00000557623 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
SLIRP-211ENST00000557623 TRIM66O15016 1216 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 P4HA2O15460 535 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 BDNFP23560 247 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ANXA13P27216 316 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 GABRR2P28476 465 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 CDC25CP30307 473 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 GRIK1P39086 918 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 CCR2P41597 374 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 FMO5P49326 533 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 NDST1P52848 882 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 INCA1Q0VD86 236 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 HTR4Q13639 388 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 CBWD6Q4V339 395 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ARHGAP15Q53QZ3 475 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 CBWD3Q5JTY5 395 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 TMEM31Q5JXX7 168 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 CBWD5Q5RIA9 395 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 SCN4BQ8IWT1 228 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ATXN3LQ9H3M9 355 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 DPEP3Q9H4B8 488 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.286e-11■■■■■ 34.8
SLIRP-211ENST00000557623 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 DUSP12Q9UNI6 340 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
SLIRP-211ENST00000557623 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 MOSPD3O75425 235 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 NOL4O94818 638 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 ERCC5P28715 1186 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-211ENST00000557623 GPR15P49685 360 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 TEAD2Q15562 447 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 DDR2Q16832 855 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 CCDC142Q17RM4 750 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
SLIRP-211ENST00000557623 TRIM67Q6ZTA4 783 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 FAM114A1Q8IWE2 563 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 CRYBG2Q8N1P7 616 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 SLC44A3Q8N4M1 653 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
SLIRP-211ENST00000557623 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 MYRFLQ96LU7 910 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 NT5C1AQ9BXI3 368 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
SLIRP-211ENST00000557623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLIRP-211ENST00000557623 NUMBLQ9Y6R0 609 aa13.29□□□□□ -0.28
SLIRP-211ENST00000557623 PATJQ8NI35 1801 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SLC38A8A6NNN8 435 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 PRR33A8MZF0 331 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 MAP3K7O43318 606 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 CILPO75339 1184 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 ECI2O75521 394 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SRFP11831 508 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 GJA1P17302 382 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 TBXAS1P24557 533 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 YWHAEP62258 255 aaKnown RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 GAREM2Q75VX8 874 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 GPR152Q8TDT2 470 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 FGF14Q92915 247 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 ELSPBP1Q96BH3 223 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 THAP9Q9H5L6 903 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-211ENST00000557623 MUC3AQ02505 3323 aa13.28□□□□□ -0.28
SLIRP-211ENST00000557623 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 M0R296 226 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 LRRN2O75325 713 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 CD58P19256 250 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
SLIRP-211ENST00000557623 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms