RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CAPN11Q9UMQ6 739 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 UBE2QL1A1L167 161 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 AQP7P3A6NL99 342 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 EXOC5O00471 708 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 DCLK1O15075 740 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CCP110O43303 1012 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 COQ9O75208 318 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 PIAS2O75928 621 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 GFPT2O94808 682 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RASAL1O95294 804 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TK1P04183 234 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 SRGAP2BP0DMP2 458 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 XRCC6P12956 609 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 HOXA5P20719 270 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CCR5P51681 352 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 ACTR2P61160 394 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 KRT17Q04695 432 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 UBE3AQ05086 875 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 DLX2Q07687 328 aaPredicted RBP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 PRKG2Q13237 762 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 UBXN2BQ14CS0 331 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 INSCQ1MX18 579 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 BMT2Q1RMZ1 405 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RNF151Q2KHN1 245 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TRIM71Q2Q1W2 868 aaKnown RBP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 SLC45A4Q5BKX6 768 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 ATXN7L2Q5T6C5 722 aaPredicted RBP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 MCTP2Q6DN12 878 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 DSTYKQ6XUX3 929 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 PRR23BQ6ZRT6 265 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RALYLQ86SE5 291 aaKnown RBP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 GAS2L3Q86XJ1 694 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF280BQ86YH2 543 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RASGRP3Q8IV61 690 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 SP8Q8IXZ3 490 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 FITM2Q8N6M3 262 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CEP70Q8NHQ1 597 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 FAM168AQ92567 244 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RABGGTAQ92696 567 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TFAP2CQ92754 450 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 GOLGA1Q92805 767 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TRAPPC9Q96Q05 1148 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 MED15Q96RN5 788 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 RBM15Q96T37 977 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CHCHD6Q9BRQ6 235 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TLR10Q9BXR5 811 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 SLC25A32Q9H2D1 315 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 NELFAQ9H3P2 528 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 JMJD4Q9H9V9 463 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 PLEKHA5Q9HAU0 1116 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 GCM1Q9NP62 436 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 XPNPEP3Q9NQH7 507 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 TMEM160Q9NX00 188 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 DKK4Q9UBT3 224 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 AASSQ9UDR5 926 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CA14Q9ULX7 337 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 ARHGAP26Q9UNA1 814 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CDYLQ9Y232 598 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 HPSEQ9Y251 543 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 ZDHHC9Q9Y397 364 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 NR2E1Q9Y466 385 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 CDY1Q9Y6F8 540 aa3.59□□□□□ -1.83
TRAV28-201ENST00000557548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TBKBP1A7MCY6 615 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 K7ENM7 598 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 POLRMTO00411 1230 aaKnown RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 HOXA3O43365 443 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 FOXD2O60548 495 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 SRGAP2O75044 1071 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 PPP6R2O75170 966 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 SEMA7AO75326 666 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 KRT38O76015 456 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 PRSS23O95084 383 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 PRKCBP05771 671 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 HNRNPA1P09651 372 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ARP10275 920 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 CYP2C9P11712 490 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 LILRA4P59901 499 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 KRTAP10-2P60368 255 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 NUCB1Q02818 461 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TCF15Q12870 199 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 GPS1Q13098 491 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 RIN1Q13671 783 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 NFYCQ13952 458 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 IQCB1Q15051 598 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ZIK1Q3SY52 487 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 MGAT5BQ3V5L5 792 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 NOMO2Q5JPE7 1267 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ATPAF1Q5TC12 328 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ITPRIPL1Q6GPH6 555 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 RINT1Q6NUQ1 792 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 RAB11FIP2Q7L804 512 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TMEFF1Q8IYR6 380 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 KLHL36Q8N4N3 616 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TCP11L2Q8N4U5 519 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 TXNDC5Q8NBS9 432 aaKnown RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 OR6Y1Q8NGX8 325 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 CENPIQ92674 756 aaPredicted RBP3.58□□□□□ -1.84
TRAV28-201ENST00000557548 ZUFSPQ96AP4 578 aa3.58□□□□□ -1.84
TRAV28-201ENST00000557548 C3orf49Q96BT1 292 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms