RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CYFIP2Q96F07 1278 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 HEXIM2Q96MH2 286 aaKnown RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 ERGIC2Q96RQ1 377 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 CORO1BQ9BR76 489 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 DNAI2Q9GZS0 605 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF334Q9HCZ1 680 aaPredicted RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 PLCB1Q9NQ66 1216 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 RTN4Q9NQC3 1192 aaKnown RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 CNTN6Q9UQ52 1028 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 A0A0C4DFX4 3053 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 F8VP50 259 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 EPHB6O15197 1021 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 TEX33O43247 280 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 NOL4O94818 638 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 SERPINC1P01008 464 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 CALCAP01258 141 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 RHOP08100 348 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 KRT5P13647 590 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 CD19P15391 556 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 PTPN2P17706 415 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 GRIK1P39086 918 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 FANCCQ00597 558 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 PTPN21Q16825 1174 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 PABPC1LQ4VXU2 614 aaKnown RBP15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 PPP1R26Q5T8A7 1209 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 TMC8Q8IU68 726 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 PSMG2Q969U7 264 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 ZNF512Q96ME7 567 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 NAP1L5Q96NT1 182 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 LRRC3Q9BY71 257 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 FAM207AQ9NSI2 230 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 ANAPC1Q9H1A4 1944 aa15.76■□□□□ 0.11
VIPAS39-210ENST00000557466 SLC38A8A6NNN8 435 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 NRG2O14511 850 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 TRIM66O15016 1216 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 AP1G2O75843 785 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 PAEPP09466 180 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 PNMA6AP0CW24 399 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 UCHL3P15374 230 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 RFX1P22670 979 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 SP100P23497 879 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 BRD2P25440 801 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 ANXA13P27216 316 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 EPHA5P54756 1037 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 RAPGEF1Q13905 1077 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 SLC5A9Q2M3M2 681 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 FILIP1LQ4L180 1135 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 SGO2Q562F6 1265 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 TJAP1Q5JTD0 557 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 PRSS36Q5K4E3 855 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 GET4Q7L5D6 327 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 DNAJB7Q7Z6W7 309 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 ITIH5Q86UX2 942 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 TFAP2BQ92481 460 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 SMOQ99835 787 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 ZSWIM1Q9BR11 485 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 PHF7Q9BWX1 381 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 NAA15Q9BXJ9 866 aaKnown RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 DMAP1Q9NPF5 467 aaPredicted RBP15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 ASAH2Q9NR71 780 aa15.75■□□□□ 0.11
VIPAS39-210ENST00000557466 O00370 1275 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 BEST1O76090 585 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 FAM200BP0CF97 657 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 VDRP11473 427 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 MYL4P12829 197 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 HMGA1P17096 107 aaKnown RBP15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 FSHRP23945 695 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 USP8P40818 1118 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 CCR2P41597 374 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 DRAP1Q14919 205 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 GOLGA7BQ2TAP0 167 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 CLEC20AQ6ZU45 233 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 PDZD4Q76G19 769 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 ITFG1Q8TB96 612 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 SPATA17Q96L03 361 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 KCNK16Q96T55 309 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 CSNK1G1Q9HCP0 422 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 AVENQ9NQS1 362 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 TSPAN16Q9UKR8 245 aa15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 NUP210Q8TEM1 1887 aaPredicted RBP15.74■□□□□ 0.11
VIPAS39-210ENST00000557466 FOXN3O00409 490 aaPredicted RBP15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 MOSPD3O75425 235 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 CSH1P0DML2 217 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 CSH2P0DML3 217 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 GJA1P17302 382 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 NPR3P17342 541 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 CEBPBP17676 345 aa15.73■□□□□ 0.11
VIPAS39-210ENST00000557466 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms