RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MED10Q9BTT4 135 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 THAP9Q9H5L6 903 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
SLIRP-209ENST00000557342 MUC3AQ02505 3323 aa13.28□□□□□ -0.28
SLIRP-209ENST00000557342 TMEM221A6NGB7 291 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 M0R296 226 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 LRRN2O75325 713 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 CD58P19256 250 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 BMP8AQ7Z5Y6 402 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
SLIRP-209ENST00000557342 MRPS31Q92665 395 aaKnown RBP13.27□□□□□ -0.29
SLIRP-209ENST00000557342 TATDN2Q93075 761 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 ZNF518BQ9C0D4 1074 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 TRPV4Q9HBA0 871 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.29
SLIRP-209ENST00000557342 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.29
SLIRP-209ENST00000557342 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 FAM86C2PA6NEL3 165 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 F8VP50 259 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 CLDN5O00501 218 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 TECTAO75443 2155 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 F11P03951 625 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 WEE1P30291 646 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 PPP3CCP48454 512 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 CUL2Q13617 745 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 CYFIP2Q96F07 1278 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 ASIC4Q96FT7 647 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 ZSWIM3Q96MP5 696 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 MED15Q96RN5 788 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 KXD1Q9BQD3 176 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 LRFN3Q9BTN0 628 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
SLIRP-209ENST00000557342 C11orf16Q9NQ32 467 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 ANO10Q9NW15 660 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 WNT16Q9UBV4 365 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
SLIRP-209ENST00000557342 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 DPYSL4O14531 572 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 NARSO43776 548 aaKnown RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 AP1G2O75843 785 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 RTN3O95197 1032 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 PTMSP20962 102 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 FCARP24071 287 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 CYP4F8P98187 520 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 PFKPQ01813 784 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 ORC1Q13415 861 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 TANGO2Q6ICL3 276 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 POTEHQ6S545 545 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 PAQR9Q6ZVX9 377 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 FUKQ8N0W3 1084 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 NUP93Q8N1F7 819 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 SLC2A14Q8TDB8 520 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 DEPDC1BQ8WUY9 529 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 PBXIP1Q96AQ6 731 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 TWNKQ96RR1 684 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 HNRNPABQ99729 332 aaKnown RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 RPP25Q9BUL9 199 aaKnown RBP13.25□□□□□ -0.29
SLIRP-209ENST00000557342 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 KRT82Q9NSB4 513 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 OBP2AQ9NY56 170 aa13.25□□□□□ -0.29
SLIRP-209ENST00000557342 TICRRQ7Z2Z1 1910 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 CFHP08603 1231 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 FAM200BP0CF97 657 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 CCDC130P13994 396 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 PFKLP17858 780 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 PSMC3P17980 439 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 PDE6CP51160 858 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 RAD23BP54727 409 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 LRMPQ12912 555 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 STX1AQ16623 288 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 MAN2A1Q16706 1144 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 ZNF394Q53GI3 561 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
SLIRP-209ENST00000557342 TMEM150AQ86TG1 271 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms