RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ALLCQ8N6M5 410 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 FBXO18Q8NFZ0 1043 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 CAPN10Q9HC96 672 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 SLC6A14Q9UN76 642 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ANAPC1Q9H1A4 1944 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 PLXNB3Q9ULL4 1909 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 WDFY3Q8IZQ1 3526 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 GCN1Q92616 2671 aaKnown RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 ATXN2Q99700 1313 aaKnown RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 ADAM23O75077 832 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 KIR2DL1P43626 348 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 ACOT2P49753 483 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 LIG4P49917 911 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 ANAPC15P60006 121 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 TXNDC5Q8NBS9 432 aaKnown RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 BICD1Q96G01 975 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 FIZ1Q96SL8 496 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 PLIN2Q99541 437 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 MSTO1Q9BUK6 570 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 ASB7Q9H672 318 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 DPP3Q9NY33 737 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 SETXQ7Z333 2677 aaKnown RBP13.51□□□□□ -0.25
PSEN1-221ENST00000557293 IGSF10Q6WRI0 2623 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 MYH11P35749 1972 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 PCDH15Q96QU1 1955 aa13.51□□□□□ -0.25
PSEN1-221ENST00000557293 TRAV19A0A0A6YYK7 116 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 TISP43B9A030 160 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 MAP3K13O43283 966 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 GJB3O75712 270 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 KLF8O95600 359 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-221ENST00000557293 HDCP19113 662 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-221ENST00000557293 TTC30AQ86WT1 665 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 TTC16Q8NEE8 873 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 ZDHHC4Q9NPG8 344 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 LARSQ9P2J5 1176 aaKnown RBP13.5□□□□□ -0.25
PSEN1-221ENST00000557293 UXTQ9UBK9 157 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-221ENST00000557293 GTF3C4Q9UKN8 822 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 ARHGAP26Q9UNA1 814 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 C2CD2Q9Y426 696 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 PLXND1Q9Y4D7 1925 aa13.5□□□□□ -0.25
PSEN1-221ENST00000557293 HNRNPDLO14979 420 aaKnown RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 HCRTO43612 131 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 NFATC1O95644 943 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 CYP17A1P05093 508 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 CKMP06732 381 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 SERPINF2P08697 491 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 PLA2G4BP0C869 781 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 TIE1P35590 1138 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 PRPHP41219 470 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 WNT7BP56706 349 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 RPL10AP62906 217 aaKnown RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 NFE2Q16621 373 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 DUOXA1Q1HG43 343 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 ZNF423Q2M1K9 1284 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 LYSMD4Q5XG99 296 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 OSTM1Q86WC4 334 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 C12orf40Q86WS4 652 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 PHTF2Q8N3S3 785 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 MINDY1Q8N5J2 469 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 CXorf38Q8TB03 319 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 RAB34Q9BZG1 259 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
PSEN1-221ENST00000557293 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 L1RE1Q9UN81 338 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
PSEN1-221ENST00000557293 H0YCG3 227 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 LEFTY2O00292 366 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 SH3BP5O60239 455 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 ALDH1A2O94788 518 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 CFIP05156 583 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 ACAT1P24752 427 aaKnown RBP13.48□□□□□ -0.25
PSEN1-221ENST00000557293 HOXD12P35452 270 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 ZNF131P52739 623 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 GTF2BQ00403 316 aa13.48□□□□□ -0.25
PSEN1-221ENST00000557293 GFPT1Q06210 699 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-221ENST00000557293 DHCR24Q15392 516 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms