RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PHF13Q86YI8 300 aaPredicted RBP16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 MAP7D3Q8IWC1 876 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 NIFKQ9BYG3 293 aaKnown RBP16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 CCDC195A0A1B0GUA6 201 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 CAPN9O14815 690 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 YY1P25490 414 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 FBXO36Q8NEA4 188 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 SERPINB12Q96P63 405 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 NT5C1AQ9BXI3 368 aa16.08■□□□□ 0.16
TMEM55B-207ENST00000557041 ASB14A6NK59 587 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 DNM1LO00429 736 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 HCRTO43612 131 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 UBOX5O94941 541 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 CTSHP09668 335 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 SAT1P21673 171 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 VCPP55072 806 aaKnown RBP16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 GDF10P55107 478 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 ROR1Q01973 937 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 STAT4Q14765 748 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 SPRED3Q2MJR0 410 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 RAB6CQ53S08 254 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 RNF34Q969K3 372 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 RAB6CQ9H0N0 254 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 SNX25Q9H3E2 840 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 MTA2O94776 668 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 ERBB2P04626 1255 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 KITP10721 976 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 EPHX2P34913 555 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 UNC45BQ8IWX7 931 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 EPB41L4BQ9H329 900 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 CPSF3Q9UKF6 684 aaKnown RBP16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 MYL3P08590 195 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 IL1R2P27930 398 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 RBP5P82980 135 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 SNAPC2Q13487 334 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 C3orf20Q8ND61 904 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 GIMAP7Q8NHV1 300 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 ATXN7L3BQ96GX2 97 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 PLCD4Q9BRC7 762 aa16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
TMEM55B-207ENST00000557041 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 A0A1W2PPM1 405 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 LRCH4O75427 683 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 HOXC6P09630 235 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 IQCF3P0C7M6 154 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 CYP2B6P20813 491 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ALDH3A1P30838 453 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 PAN2Q504Q3 1202 aaKnown RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ZC3H12AQ5D1E8 599 aaKnown RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ANKRD22Q5VYY1 191 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 FBF1Q8TES7 1133 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ROPN1BQ9BZX4 212 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ROPN1Q9HAT0 212 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 GOLGA2P5Q9HBQ8 144 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 AAASQ9NRG9 546 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 PDHXO00330 501 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 DNALI1O14645 258 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ACAT1P24752 427 aaKnown RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 MMP13P45452 471 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 SNCBQ16143 134 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ELOVL4Q9GZR5 314 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 ECT2Q9H8V3 914 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 NPHS2Q9NP85 383 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 CETPP11597 493 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 SYDE1Q6ZW31 735 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 EXOC8Q8IYI6 725 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 CCDC110Q8TBZ0 833 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 FAM172AQ8WUF8 416 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 C18orf25Q96B23 403 aaPredicted RBP16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 TLCD1Q96CP7 247 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 TRIM33Q9UPN9 1127 aa16.06■□□□□ 0.16
TMEM55B-207ENST00000557041 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 NEBLO76041 1014 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 ICAM3P32942 547 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 LVRNQ6Q4G3 990 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 FAM131BQ86XD5 332 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 CACNG4Q9UBN1 327 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 CPA4Q9UI42 421 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 hCG_1818297A0A087WSY0 165 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 RABGGTBP53611 331 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 TNFAIP2Q03169 654 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 ANKRD20A8PQ5CZ79 823 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 CCHCR1Q8TD31 782 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 PIWIL1Q96J94 861 aaKnown RBP16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 ETNK1Q9HBU6 452 aa16.05■□□□□ 0.16
TMEM55B-207ENST00000557041 TXNDC16Q9P2K2 825 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms