RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 EXOC6BQ9Y2D4 811 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 IPPQ9Y573 584 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 LMO7Q8WWI1 1683 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 MST1RQ04912 1400 aa5.39□□□□□ -1.55
ATXN3-246ENST00000557030 POLR2AP24928 1970 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 CAMTA1Q9Y6Y1 1673 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KDM3BQ7LBC6 1761 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 N4BP2Q86UW6 1770 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TCRBV7S2A1N4TA0A589 114 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 PIPSLA2A3N6 862 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 CCDC78A2IDD5 438 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 HIP1O00291 1037 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KIAA0391O15091 583 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TEX33O43247 280 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KCNQ3O43525 872 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 IL33O95760 270 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 POMCP01189 267 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 SPATA31D3P0C874 917 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 UBTFL1P0CB47 393 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 EGR2P11161 476 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 SLC6A2P23975 617 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 ADKP55263 362 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 EIF4A1P60842 406 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 DACT2Q5SW24 774 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 VPS53Q5VIR6 699 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TAF3Q5VWG9 929 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 SPATA31D4Q6ZUB0 917 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KRT28Q7Z3Y7 464 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 KCNH5Q8NCM2 988 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 BEND2Q8NDZ0 799 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 OR56A1Q8NGH5 318 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 GPR150Q8NGU9 434 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 SSH3Q8TE77 659 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 HOOK2Q96ED9 719 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 COQ10AQ96MF6 247 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TTC14Q96N46 770 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TM6SF1Q9BZW5 370 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 ALG13Q9NP73 1137 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TMEM74BQ9NUR3 256 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 DDX19AQ9NUU7 478 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 CHPF2Q9P2E5 772 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 ANKFY1Q9P2R3 1169 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 EPN1Q9Y6I3 576 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 ELP1O95163 1332 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 TTC41PQ6P2S7 1318 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 USP42Q9H9J4 1324 aaKnown RBP5.38□□□□□ -1.55
ATXN3-246ENST00000557030 JCADQ9P266 1359 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 C1orf167Q5SNV9 1468 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 PXDNQ92626 1479 aa5.38□□□□□ -1.55
ATXN3-246ENST00000557030 RNMTO43148 476 aaKnown RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 NEMFO60524 1076 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 RHOBTB3O94955 611 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 SPDEFO95238 335 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 HOXB7P09629 217 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 SYT1P21579 422 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 PSMA5P28066 241 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 RAB27AP51159 221 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 CDC42EP1Q00587 391 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 CREMQ03060 361 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 OCA2Q04671 838 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 ANKRD1Q15327 319 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 NFE2Q16621 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 ARMC6Q6NXE6 501 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 FMNL3Q8IVF7 1028 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 TMEM132CQ8N3T6 1108 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 DCBLD1Q8N8Z6 715 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 KIAA1524Q8TCG1 905 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 FUCA2Q9BTY2 467 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 UPF3BQ9BZI7 483 aaKnown RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 LSG1Q9H089 658 aaKnown RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 USP44Q9H0E7 712 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 C11orf54Q9H0W9 315 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 CNPY2Q9Y2B0 182 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 SNX14Q9Y5W7 946 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 CYP46A1Q9Y6A2 500 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 COL16A1Q07092 1604 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-246ENST00000557030 ALS2Q96Q42 1657 aa5.37□□□□□ -1.55
ATXN3-246ENST00000557030 PNMA6EA0A0J9YXQ4 647 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 SMTNL1A8MU46 457 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CTIFO43310 598 aaKnown RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 FIBPO43427 364 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 AKAP10O43572 662 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 LMNAP02545 664 aaKnown RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ZKSCAN1P17029 563 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 TYRP1P17643 537 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 DDX6P26196 483 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 AK2P54819 239 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ZNF280AP59817 542 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 FAM193AP78312 1265 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 RESTQ13127 1097 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 TP53BP2Q13625 1128 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 DHX8Q14562 1220 aaKnown RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 LRRC41Q15345 812 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms