RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 SPATA2LQ8IUW3 424 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 WDR49Q8IV35 697 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 ARID3BQ8IVW6 561 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 NELFCDQ8IXH7 590 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 ADGRF2Q8IZF7 708 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 PDCL2Q8N4E4 241 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 XXYLT1Q8NBI6 393 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 ZSWIM2Q8NEG5 633 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 LEO1Q8WVC0 666 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 FAM3CQ92520 227 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 HPS3Q969F9 1004 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 MSANTD3Q96H12 275 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 ZSWIM3Q96MP5 696 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 LPIN3Q9BQK8 851 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 PI4K2AQ9BTU6 479 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 LRRC3Q9BY71 257 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 BLZF1Q9H2G9 400 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 TASP1Q9H6P5 420 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 C8orf33Q9H7E9 229 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 AGPAT3Q9NRZ7 376 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 INTS13Q9NVM9 706 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 THG1LQ9NWX6 298 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 GDAP2Q9NXN4 497 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 OBP2AQ9NY56 170 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 UXTQ9UBK9 157 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 FBXO4Q9UKT5 387 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 NDRG2Q9UN36 371 aaKnown RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 L1RE1Q9UN81 338 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 MAGED2Q9UNF1 606 aaPredicted RBP8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 PIAS3Q9Y6X2 628 aa8.25□□□□□ -1.09
HNRNPC-226ENST00000556628 ZNF638Q14966 1978 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 TRIOO75962 3097 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CLIC2O15247 247 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 KINO60870 393 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 PHACTR2O75167 634 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 LMNAP02545 664 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 ATF6P18850 670 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 DDX6P26196 483 aaKnown RBP eCLIP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 AVPR1AP37288 418 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 RPS9P46781 194 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CYP2J2P51589 502 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CDR1P51861 262 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 KRT85P78386 507 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CYP4F8P98187 520 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CSTF1Q05048 431 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 TRPC3Q13507 836 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 MAPRE1Q15691 268 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 SNRNP35Q16560 246 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 STXBP5Q5T5C0 1151 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 C4orf50Q6ZRC1 276 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 EPM2AIP1Q7L775 607 aaPredicted RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 TRAPPC11Q7Z392 1133 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CBWD2Q8IUF1 395 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 SCN4BQ8IWT1 228 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 ADSSL1Q8N142 457 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CELF5Q8N6W0 485 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 ZSCAN1Q8NBB4 408 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 GOLGA5Q8TBA6 731 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 BPIFB1Q8TDL5 484 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 MRPS31Q92665 395 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CCDC47Q96A33 483 aaKnown RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 HPDLQ96IR7 371 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 SPATA32Q96LK8 384 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 MMS19Q96T76 1030 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 CGRRF1Q99675 332 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 IER2Q9BTL4 223 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 SLC39A2Q9NP94 309 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 MAGEC2Q9UBF1 373 aaPredicted RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 USP25Q9UHP3 1055 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 SERTAD1Q9UHV2 236 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 RCOR1Q9UKL0 485 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 GTF3C4Q9UKN8 822 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 MTF2Q9Y483 593 aaPredicted RBP8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 ATP6V1DQ9Y5K8 247 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 R4GN57 208 aa8.24□□□□□ -1.09
HNRNPC-226ENST00000556628 DENND4CQ5VZ89 1909 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 TGFB1I1O43294 461 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 EXOC3O60645 756 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 KIF20AO95235 890 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 SLFN14P0C7P3 912 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 ACAT1P24752 427 aaKnown RBP8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CCNE1P24864 410 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CASP1P29466 404 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 WEE1P30291 646 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CTHP32929 405 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 NRLP54845 237 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 MLLT6P55198 1093 aaPredicted RBP8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 TNNC1P63316 161 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 FCHO2Q0JRZ9 810 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 PSMD2Q13200 908 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 CUL4BQ13620 913 aa8.23□□□□□ -1.09
HNRNPC-226ENST00000556628 LRRC32Q14392 662 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms