RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 RBBP8NLQ8NC74 664 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 RNF141Q8WVD5 230 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HAS1Q92839 578 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 KIFAP3Q92845 792 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HVCN1Q96D96 273 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 ATP6V1G3Q96LB4 118 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 CCDC43Q96MW1 224 aaKnown RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 RIT2Q99578 217 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PLCD4Q9BRC7 762 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PAGR1Q9BTK6 254 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TLR10Q9BXR5 811 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 CARD9Q9H257 536 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 EPC1Q9H2F5 836 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 RPAP3Q9H6T3 665 aaPredicted RBP6.55□□□□□ -1.36
CPSF2-205ENST00000556622 PARVGQ9HBI0 331 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 EPB41L5Q9HCM4 733 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 RBPJLQ9UBG7 517 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 HDAC6Q9UBN7 1215 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 SRRDQ9UH36 339 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 TMX2Q9Y320 296 aa6.55□□□□□ -1.36
CPSF2-205ENST00000556622 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 F5H6K3 240 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 H0YHG0 523 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 KRIT1O00522 736 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 NDUFAB1O14561 156 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 KCNK3O14649 394 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SLC37A4O43826 429 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SRGAP2O75044 1071 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 GCNT3O95395 438 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 NR3C1P04150 777 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 INHBBP09529 407 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 VCAM1P19320 739 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 ITIH2P19823 946 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TNFAIP3P21580 790 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 GUCY2CP25092 1073 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CTGFP29279 349 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 HSPA9P38646 679 aaKnown RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 MATR3P43243 847 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 STAT2P52630 851 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CCNA1P78396 465 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CAP1Q01518 475 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 GUCY2DQ02846 1103 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CAV1Q03135 178 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 KLRC3Q07444 240 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 C2orf54Q08AI8 447 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 IFFO1Q0D2I5 559 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 PPP2R5CQ13362 524 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 GIT2Q14161 759 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 EPHA7Q15375 998 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 FAM110CQ1W6H9 321 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 QRICH1Q2TAL8 776 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 PRR16Q569H4 304 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 WDR78Q5VTH9 848 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TCERG1LQ5VWI1 586 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 XRRA1Q6P2D8 792 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 ENOSF1Q7L5Y1 443 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 EPM2AIP1Q7L775 607 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TAOK1Q7L7X3 1001 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CATSPER3Q86XQ3 398 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 NT5DC4Q86YG4 428 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 FAM186BQ8IYM0 893 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SYCP3Q8IZU3 236 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 IQCKQ8N0W5 287 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 BBOF1Q8ND07 529 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SCFD1Q8WVM8 642 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 IFT81Q8WYA0 676 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 RFFLQ8WZ73 363 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 DHX38Q92620 1227 aaKnown RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 LPAR1Q92633 364 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 ATG4CQ96DT6 458 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 C12orf42Q96LP6 360 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 HSPA12BQ96MM6 686 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 RPS6KC1Q96S38 1066 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 GPR62Q9BZJ7 368 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 DUSP15Q9H1R2 295 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 EPN3Q9H201 632 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 VCPKMTQ9H867 229 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 ACTR5Q9H9F9 607 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 C17orf75Q9HAS0 396 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 NLRC4Q9NPP4 1024 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 ST7Q9NRC1 585 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 TRIM10Q9UDY6 481 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 RAPGEFL1Q9UHV5 662 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 CTDP1Q9Y5B0 961 aaPredicted RBP6.54□□□□□ -1.36
CPSF2-205ENST00000556622 PCDHGB7Q9Y5F8 929 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 PCDHA2Q9Y5H9 948 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 PTCH2Q9Y6C5 1203 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 SIPA1L1O43166 1804 aa6.54□□□□□ -1.36
CPSF2-205ENST00000556622 MYPNQ86TC9 1320 aa6.53□□□□□ -1.36
CPSF2-205ENST00000556622 ADGRA2Q96PE1 1338 aa6.53□□□□□ -1.36
CPSF2-205ENST00000556622 KIAA0391O15091 583 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms