RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 SCN4BQ8IWT1 228 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 TCEAL8Q8IYN2 117 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 ANKRD52Q8NB46 1076 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 ATAD1Q8NBU5 361 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 AGPAT1Q99943 283 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABCD4-225ENST00000556517 PLEKHA4Q9H4M7 779 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 PCDHGC3Q9UN70 934 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 VWA8A3KMH1 1905 aa13.25□□□□□ -0.29
ABCD4-225ENST00000556517 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CALCAP01258 141 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 LRG1P02750 347 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SPATA31D3P0C874 917 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SKILP12757 684 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 TNFAIP3P21580 790 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CYP2F1P24903 491 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SNX16P57768 344 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CDK17Q00537 523 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 TAF12Q16514 161 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 TCEAL5Q5H9L2 206 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-225ENST00000556517 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 LLGL2Q6P1M3 1020 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SPATA31D4Q6ZUB0 917 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 ELMOD1Q8N336 334 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 MICALL1Q8N3F8 863 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 DEFB123Q8N688 67 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 TMEM35BQ8NCS4 154 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 HDAC7Q8WUI4 952 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC42Q96M95 316 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 LHX5Q9H2C1 402 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 IGFLR1Q9H665 355 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SYNCQ9H7C4 482 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 MAN1C1Q9NR34 630 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 DZANK1Q9NVP4 752 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 HCFC2Q9Y5Z7 792 aa13.24□□□□□ -0.29
ABCD4-225ENST00000556517 F8VP50 259 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 NCK2O43639 380 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 AKR1B10O60218 316 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 C8AP07357 584 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 HAPLN1P10915 354 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 EPHB3P54753 998 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 MAP3K7CLP57077 242 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 PPM1LQ5SGD2 360 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 CLEC20AQ6ZU45 233 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 ITIH5Q86UX2 942 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 UBA3Q8TBC4 463 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 IPO4Q8TEX9 1081 aaKnown RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 CASP10Q92851 521 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 CEP295NLQ96MC4 621 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 BAG1Q99933 345 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-225ENST00000556517 ZSWIM1Q9BR11 485 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 ST7Q9NRC1 585 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 INSL5Q9Y5Q6 135 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 MTCH2Q9Y6C9 303 aa13.23□□□□□ -0.29
ABCD4-225ENST00000556517 CHD7Q9P2D1 2997 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 SSU72P8A0A1W2PR75 194 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
ABCD4-225ENST00000556517 SEC24AO95486 1093 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 FOSL2P15408 326 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 EPCAMP16422 314 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 EIF4A3P38919 411 aaKnown RBP13.22□□□□□ -0.29
ABCD4-225ENST00000556517 NSFP46459 744 aaKnown RBP13.22□□□□□ -0.29
ABCD4-225ENST00000556517 FMO1Q01740 532 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 PDE4CQ08493 712 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 TWF1Q12792 350 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 HGSNATQ68CP4 663 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 DENND1BQ6P3S1 775 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 PAQR9Q6ZVX9 377 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 Q7L0L9 218 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-225ENST00000556517 TMTC1Q8IUR5 882 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 TTC9BQ8N6N2 239 aa13.22□□□□□ -0.29
ABCD4-225ENST00000556517 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms