RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ANTXRLA6NF34 631 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 MYMKA6NI61 221 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 EIF4E1BA6NMX2 242 aaKnown RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 NOL4O94818 638 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 ADRB2P07550 413 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 ITPKAP23677 461 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 CYP2F1P24903 491 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 TIE1P35590 1138 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 OPRD1P41143 372 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 ACOT2P49753 483 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 MRPS21P82921 87 aaKnown RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SCAPQ12770 1279 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 ZNF423Q2M1K9 1284 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 COL28A1Q2UY09 1125 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SLC23A3Q6PIS1 610 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 TMEM92Q6UXU6 159 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SCN4BQ8IWT1 228 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SYT2Q8N9I0 419 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SPRYD3Q8NCJ5 442 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 OLIG1Q8TAK6 271 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 TRMT2BQ96GJ1 504 aaKnown RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 ZNF560Q96MR9 790 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 MMTAG2Q9BU76 263 aaKnown RBP14.98□□□□□ -0.01
ACTN1-219ENST00000556432 KCND2Q9NZV8 630 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 SLC6A14Q9UN76 642 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 C2CD2Q9Y426 696 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 PCDHB6Q9Y5E3 794 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 PI4KAP42356 2102 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 TCHHQ07283 1943 aa14.98□□□□□ -0.01
ACTN1-219ENST00000556432 TCRBV21S2A2A0A5A6 115 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 UPK3BL1B0FP48 263 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 UPK3BL2E5RIL1 263 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 FAM13AO94988 1023 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 PLA2G4BP0C869 781 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 HNRNPLP14866 589 aaKnown RBP eCLIP14.97□□□□□ -0.01
ACTN1-219ENST00000556432 HDCP19113 662 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 ACAT1P24752 427 aaKnown RBP14.97□□□□□ -0.01
ACTN1-219ENST00000556432 NEK4P51957 841 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 FAM193AP78312 1265 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 RPL6Q02878 288 aaKnown RBP14.97□□□□□ -0.01
ACTN1-219ENST00000556432 DUOXA1Q1HG43 343 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 DEFB119Q8N690 84 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 MYCT1Q8N699 235 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 CEP76Q8TAP6 659 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 SPATA18Q8TC71 538 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 COL26A1Q96A83 441 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 ZHX3Q9H4I2 956 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 ASB7Q9H672 318 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 ABCB6Q9NP58 842 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 PILRBQ9UKJ0 227 aa14.97□□□□□ -0.01
ACTN1-219ENST00000556432 IGSF10Q6WRI0 2623 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 ADAMTS20P59510 1910 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 SGK1O00141 431 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 LAD1O00515 517 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 AP5Z1O43299 807 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 FLNBO75369 2602 aaKnown RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 APODP05090 189 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 HOXD12P35452 270 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 PDE6CP51160 858 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 SLC12A3P55017 1021 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 ST3GAL1Q11201 340 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 DHX8Q14562 1220 aaKnown RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 IL17AQ16552 155 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 ADALQ6DHV7 355 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 RAB44Q7Z6P3 723 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 SPATA2LQ8IUW3 424 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 SFTPA1Q8IWL2 248 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 MINDY1Q8N5J2 469 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 IL17RCQ8NAC3 791 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 FBXO18Q8NFZ0 1043 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 OR2I1PQ8NGU4 316 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 LEO1Q8WVC0 666 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 MYRFLQ96LU7 910 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 CCSER1Q9C0I3 900 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 ZDHHC4Q9NPG8 344 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 DDX43Q9NXZ2 648 aaKnown RBP14.96□□□□□ -0.01
ACTN1-219ENST00000556432 ARHGAP26Q9UNA1 814 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 PCDHB9Q9Y5E1 797 aa14.96□□□□□ -0.01
ACTN1-219ENST00000556432 SCAMP3O14828 347 aaKnown RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 HUS1O60921 280 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 ZIC2O95409 532 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 PIGRP01833 764 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 CYP17A1P05093 508 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 SCP2P22307 547 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 PRPHP41219 470 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 PNPLA4P41247 253 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 MYL7Q01449 175 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 KDSRQ06136 332 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 RESTQ13127 1097 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 HNRNPDQ14103 355 aaKnown RBP14.95□□□□□ -0.02
ACTN1-219ENST00000556432 MAP7D1Q3KQU3 841 aa14.95□□□□□ -0.02
ACTN1-219ENST00000556432 INTS6LQ5JSJ4 861 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms