RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ZMYND10O75800 440 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 ANXA13P27216 316 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 ZBED6P86452 979 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 GOLGA8FQ08AF8 430 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 GOLGA8DPQ0D2H9 430 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 KCNC3Q14003 757 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 CLUL1Q15846 466 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 ARHGAP17Q68EM7 881 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 TMC5Q6UXY8 1006 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 STKLD1Q8NE28 680 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 ZNF606Q8WXB4 792 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 KCNK16Q96T55 309 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 DZANK1Q9NVP4 752 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 SZT2Q5T011 3432 aa14.88□□□□□ -0.03
VIPAS39-208ENST00000556412 TBX10O75333 385 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 MICAL2O94851 1124 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 C1RP00736 705 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 CCDC172P0C7W6 258 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 FERP16591 822 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 KRT9P35527 623 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 MAGEA11P43364 429 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 MRE11P49959 708 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 SLC8A3P57103 927 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 RPL10AP62906 217 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 DLX2Q07687 328 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 RARS2Q5T160 578 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 ANKRD54Q6NXT1 300 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 MAFAQ8NHW3 353 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 PABPC5Q96DU9 382 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 SFXN1Q9H9B4 322 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 CCDC195A0A1B0GUA6 201 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 TRIM66O15016 1216 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 BEST1O76090 585 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 CFHP08603 1231 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 NPR3P17342 541 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 ATF6P18850 670 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 EPHB3P54753 998 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 ADKP55263 362 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 IFRD2Q12894 506 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 VEPH1Q14D04 833 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 STILQ15468 1287 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 CNGA2Q16280 664 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 TAF12Q16514 161 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 LCLAT1Q6UWP7 414 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 TTC30AQ86WT1 665 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 FMNL3Q8IVF7 1028 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 ELMOD1Q8N336 334 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 ANKRD52Q8NB46 1076 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 EPS8L1Q8TE68 723 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 HDAC7Q8WUI4 952 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 SLC20A1Q8WUM9 679 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 SMOQ99835 787 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 PIDD1Q9HB75 910 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 TMEM30AQ9NV96 361 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 SEPT11Q9NVA2 429 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 HSFX1Q9UBD0 423 aa14.87□□□□□ -0.03
VIPAS39-208ENST00000556412 TRANK1O15050 2925 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 H3BQ06 376 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 KCNA5P22460 613 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 BCAT1P54687 386 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 PLD1Q13393 1074 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 E4F1Q66K89 784 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 DENND1BQ6P3S1 775 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 TMEM184AQ6ZMB5 413 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 CLEC20AQ6ZU45 233 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 DUSP16Q9BY84 665 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 NUCKS1Q9H1E3 243 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 ZDHHC7Q9NXF8 308 aa14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 MAGED2Q9UNF1 606 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-208ENST00000556412 AKR1B15C9JRZ8 316 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 MFAP3LO75121 409 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 XYLBO75191 536 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 MMEP08473 750 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 SKILP12757 684 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 PDE4CQ08493 712 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 KLHL30Q0D2K2 578 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 BST2Q10589 180 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 CTC1Q2NKJ3 1217 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 TSR1Q2NL82 804 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 FEZF2Q8TBJ5 459 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 SMG7Q92540 1137 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 SECISBP2LQ93073 1101 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 ZNF512Q96ME7 567 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 NOCTQ9UK39 431 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 TULP2O00295 520 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 HNRNPA1P09651 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 HOXB8P17481 243 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 CDC25BP30305 580 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 LTBRP36941 435 aa14.85□□□□□ -0.03
VIPAS39-208ENST00000556412 TBX2Q13207 712 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms