RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CNOT6LQ96LI5 555 aaKnown RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 B3GNT5Q9BYG0 378 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 SAMSN1Q9NSI8 373 aaKnown RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 ABI2Q9NYB9 513 aaPredicted RBP10.29□□□□□ -0.76
SRP54-210ENST00000556380 EPS15L1Q9UBC2 864 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 NR2E1Q9Y466 385 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 ASB3Q9Y575 518 aa10.29□□□□□ -0.76
SRP54-210ENST00000556380 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 TNFRSF10AO00220 468 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 DLL1O00548 723 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 CILPO75339 1184 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 ADH1BP00325 375 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 LAMP2P13473 410 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 HMGA1P17096 107 aaKnown RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 FSHRP23945 695 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 GPR15P49685 360 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 NDST1P52848 882 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 EPHB3P54753 998 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 MAPRE1Q15691 268 aaKnown RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 MGAT5BQ3V5L5 792 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 CAVIN1Q6NZI2 390 aaKnown RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 SASS6Q6UVJ0 657 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 C11orf57Q6ZUT1 292 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 RNF135Q8IUD6 432 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 SPATA2LQ8IUW3 424 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 TCEAL4Q96EI5 215 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 ZNF512Q96ME7 567 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 ARID3AQ99856 593 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 CORO1BQ9BR76 489 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 FUCA2Q9BTY2 467 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 IMPG2Q9BZV3 1241 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 ELOVL4Q9GZR5 314 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 FAM124BQ9H5Z6 455 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 TMEM30AQ9NV96 361 aa10.28□□□□□ -0.76
SRP54-210ENST00000556380 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.28□□□□□ -0.76
SRP54-210ENST00000556380 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
SRP54-210ENST00000556380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
SRP54-210ENST00000556380 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.76
SRP54-210ENST00000556380 ANHXE9PGG2 379 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 PTMSP20962 102 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ACO1P21399 889 aaKnown RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 SP100P23497 879 aaPredicted RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 BDNFP23560 247 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 SSTR3P32745 418 aaPredicted RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 SLC19A1P41440 591 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 CACNA2D1P54289 1103 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 TYRO3Q06418 890 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ORC1Q13415 861 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 CUL2Q13617 745 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 NCAPHQ15003 741 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 STX1AQ16623 288 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 DDR2Q16832 855 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 MIIPQ5JXC2 388 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 SDHAF4Q5VUM1 108 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 CDKAL1Q5VV42 579 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 IQCEQ6IPM2 695 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 DPY19L2P1Q6NXN4 242 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 VSTM1Q6UX27 236 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 C4orf50Q6ZRC1 276 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ACOT1Q86TX2 421 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 FUKQ8N0W3 1084 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ELMOD1Q8N336 334 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 TDRD5Q8NAT2 981 aaKnown RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 LEMD2Q8NC56 503 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 CCDC150Q8NCX0 1101 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 SHKBP1Q8TBC3 707 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 GIPC2Q8TF65 315 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 FGF13Q92913 245 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 TNIP3Q96KP6 325 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 SPATA17Q96L03 361 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 C8orf48Q96LL4 319 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 MYRFLQ96LU7 910 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ZNF518BQ9C0D4 1074 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 HSD3B7Q9H2F3 369 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ZNF334Q9HCZ1 680 aaPredicted RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 LIMD1Q9UGP4 676 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 CDH7Q9ULB5 785 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 MRPS23Q9Y3D9 190 aaKnown RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 NFE2L3Q9Y4A8 694 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 ZFP37Q9Y6Q3 630 aaPredicted RBP10.27□□□□□ -0.77
SRP54-210ENST00000556380 DENND4AQ7Z401 1863 aa10.27□□□□□ -0.77
SRP54-210ENST00000556380 MYO10Q9HD67 2058 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 GTPBP10A4D1E9 387 aaKnown RBP10.26□□□□□ -0.77
SRP54-210ENST00000556380 PI4K2BG5E9Z4 385 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 CLDN5O00501 218 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 ZNF197O14709 1029 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 NOL4O94818 638 aa10.26□□□□□ -0.77
SRP54-210ENST00000556380 ZNF18P17022 549 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms