RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CLUHO75153 1309 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NLRC5Q86WI3 1866 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 MYH7P12883 1935 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 KIAA1217Q5T5P2 1943 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 DDX39AO00148 427 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PRRG2O14669 202 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 INPPL1O15357 1258 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 LRRN2O75325 713 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 RFPL2O75678 378 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 GLUD1P00367 558 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 URODP06132 367 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SLC11A1P49279 550 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 RAB27AP51159 221 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 GPC3P51654 580 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 CLCN3P51790 818 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF143P52747 638 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 AK2P54819 239 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 LINC00310P59036 64 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PFKPQ01813 784 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 EGR3Q06889 387 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 DMWDQ09019 674 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SNW1Q13573 536 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 HTR4Q13639 388 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 TCEAL1Q15170 157 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 DDR2Q16832 855 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 ZBTB41Q5SVQ8 909 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 TDRD10Q5VZ19 366 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 KIAA1211LQ6NV74 962 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 C6orf15Q6UXA7 325 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 NIPA1Q7RTP0 329 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 TRMT1LQ7Z2T5 733 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 CCDC60Q8IWA6 550 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SMAP1Q8IYB5 467 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 LINC01465Q8N7H1 131 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 DDX1Q92499 740 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SMG7Q92540 1137 aaKnown RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PHKBQ93100 1093 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 CLDN23Q96B33 292 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF707Q96C28 371 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PGBD4Q96DM1 585 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 FAM167AQ96KS9 214 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 SCLT1Q96NL6 688 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 FAM193BQ96PV7 902 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 TMEM175Q9BSA9 504 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 VN1R3Q9BXE9 311 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 GCOM2Q9BZD3 368 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 INO80BQ9C086 356 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-239ENST00000556315 NT5C3AQ9H0P0 336 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 LY9Q9HBG7 655 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 TBC1D22BQ9NU19 505 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 ZDHHC7Q9NXF8 308 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PRR13Q9NZ81 148 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 RAB23Q9ULC3 237 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHA10Q9Y5I2 948 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATXN3-239ENST00000556315 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 FITM1A5D6W6 292 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 E7EWF7 191 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 IPO5O00410 1097 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 NRP1O14786 923 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 TEX28O15482 410 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LRP3O75074 770 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 DDHD2O94830 711 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 PLEKHA8P1O95397 391 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 SOD2P04179 222 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 TP53P04637 393 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 RETP07949 1114 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 CYP21A2P08686 494 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 CALM1P0DP23 149 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 CALM2P0DP24 149 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 CALM3P0DP25 149 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 FGFR4P22455 802 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 SFPQP23246 707 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 HDAC1Q13547 482 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 AUHQ13825 339 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 UBXN2BQ14CS0 331 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 HEATR6Q6AI08 1181 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 TWF2Q6IBS0 349 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 PLA2G4DQ86XP0 818 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF280BQ86YH2 543 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 GPR65Q8IYL9 337 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 OXR1Q8N573 874 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 CELF2-AS1Q8N7Q2 184 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 ENOX1Q8TC92 643 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 URGCPQ8TCY9 931 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms