RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	EPHB4	P54760	987 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	PRR5	P85299	388 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	CYP4A11	Q02928	519 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	NPY5R	Q15761	445 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMEM266	Q2M3C6	531 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	XKR9	Q5GH70	373 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	ZNF484	Q5JVG2	852 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	EFCAB12	Q6NXP0	572 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	ZC3H14	Q6PJT7	736 aa	Known RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	MTHFD1L	Q6UB35	978 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	LRRC8D	Q7L1W4	858 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	MAEA	Q7L5Y9	396 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	OTUD6A	Q7L8S5	288 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	PLPPR4	Q7Z2D5	763 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMC6	Q7Z403	805 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	NOSTRIN	Q8IVI9	506 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	FAM177A1	Q8N128	213 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	LMBR1	Q8WVP7	490 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	CRYGN	Q8WXF5	182 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	PTPRN2	Q92932	1015 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	KISS1R	Q969F8	398 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	DYDC2	Q96IM9	177 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	FAM20A	Q96MK3	541 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	PCYT2	Q99447	389 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	RIT2	Q99578	217 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	SGPP1	Q9BX95	441 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	MTIF3	Q9H2K0	278 aa	Known RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	FOXP1	Q9H334	677 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	RGL1	Q9NZL6	768 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TUBE1	Q9UJT0	475 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	NUDT5	Q9UKK9	219 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TBX21	Q9UL17	535 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	COA3	Q9Y2R0	106 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TRAF6	Q9Y4K3	522 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	SLC4A7	Q9Y6M7	1214 aa		5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	TCF20	Q9UGU0	1960 aa	Known RBP	5.18	□□□□□ -1.58
ATXN3-238	ENST00000556288	ANK1	P16157	1881 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TEX51	A0A1B0GUA7	166 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMEM150B	A6NC51	233 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288		H7BY64	318 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	DKC1	O60832	514 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PSMD10	O75832	226 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	VTN	P04004	478 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	SRGAP2C	P0DJJ0	459 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMOD1	P28289	359 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	CCT6A	P40227	531 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	QARS	P47897	775 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	DNM2	P50570	870 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	RABGGTB	P53611	331 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	GPR85	P60893	370 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PSMC5	P62195	406 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	EPHA7	Q15375	998 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	UGCG	Q16739	394 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMEM240	Q5SV17	173 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	MROH9	Q5TGP6	573 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PPP4R3A	Q6IN85	833 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	MOXD1	Q6UVY6	613 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	C16orf59	Q7L2K0	433 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	SERINC5	Q86VE9	423 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	LRRC71	Q8N4P6	559 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	NETO2	Q8NC67	525 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	RASSF8	Q8NHQ8	419 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	ERMN	Q8TAM6	284 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	CAGE1	Q8TC20	777 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	AFAP1L1	Q8TED9	768 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	ATP8B4	Q8TF62	1192 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	HAS1	Q92839	578 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	LENG9	Q96B70	501 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PEX11G	Q96HA9	241 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	FAM167A	Q96KS9	214 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	CEP170P1	Q96L14	293 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PLIN2	Q99541	437 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	ZFYVE21	Q9BQ24	234 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	WNT8A	Q9H1J5	351 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TMEM60	Q9H2L4	133 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	MSRA	Q9UJ68	235 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	SIT1	Q9Y3P8	196 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	PCDHB6	Q9Y5E3	794 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	HCFC2	Q9Y5Z7	792 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	CDY2A	Q9Y6F7	541 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288		X6R8D5	127 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	KIAA1671	Q9BY89	1806 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	TTC3	P53804	2025 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	EMSY	Q7Z589	1322 aa		5.17	□□□□□ -1.58
ATXN3-238	ENST00000556288	CCDC163	A0A0D9SF12	145 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	VWA3A	A6NCI4	1184 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	ETV2	O00321	342 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	TBX3	O15119	743 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	MAGEB2	O15479	319 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	CHRNA1	P02708	482 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	OR52Z1	P0C646	297 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	GHR	P10912	638 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	SYT1	P21579	422 aa		5.16	□□□□□ -1.58
ATXN3-238	ENST00000556288	U2AF2	P26368	475 aa	Known RBP eCLIP	5.16	□□□□□ -1.58

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