RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 COL4A3BPQ9Y5P4 624 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 CNTNAP2Q9UHC6 1331 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 ZNF292O60281 2723 aa9.96□□□□□ -0.82
GTF2A1-204ENST00000556268 CCDC195A0A1B0GUA6 201 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 TEX28O15482 410 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 DKC1O60832 514 aaKnown RBP eCLIP9.95□□□□□ -0.827e-71■■■■■ 267.5
GTF2A1-204ENST00000556268 SRGAP2CP0DJJ0 459 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 PSMA5P28066 241 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 POLR2BP30876 1174 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 CA8P35219 290 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 TXKP42681 527 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 ZNF165P49910 485 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 SSRP1Q08945 709 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 LAMTOR4Q0VGL1 99 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 EPHA7Q15375 998 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 GAB4Q2WGN9 574 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 CCDC149Q6ZUS6 474 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 ADSSL1Q8N142 457 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 GSTCDQ8NEC7 633 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 HAS1Q92839 578 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 TMEM143Q96AN5 459 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 ZNF707Q96C28 371 aaPredicted RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 NLRP4Q96MN2 994 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 KRTAP4-12Q9BQ66 201 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 SEMA4AQ9H3S1 761 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 MARCH5Q9NX47 278 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 DDX25Q9UHL0 483 aaKnown RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 DPP7Q9UHL4 492 aa9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
GTF2A1-204ENST00000556268 ANHXE9PGG2 379 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 TBX3O15119 743 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 EPB41L2O43491 1005 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 NARSO43776 548 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 SLC37A4O43826 429 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 SLITRK3O94933 977 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 DEXIO95424 95 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 POMCP01189 267 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 AXLP30530 894 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 PTENP60484 403 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 DSG1Q02413 1049 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 NONOQ15233 471 aaKnown RBP eCLIP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 ANGPT1Q15389 498 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 CDCP2Q5VXM1 449 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 PLA2G4FQ68DD2 849 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 CREG2Q8IUH2 290 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 PSPC1Q8WXF1 523 aaKnown RBP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 RSAD2Q8WXG1 361 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 CEP170P1Q96L14 293 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 FAM193BQ96PV7 902 aaPredicted RBP9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 ALPK1Q96QP1 1244 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 HERC2P3Q9BVR0 1158 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 NT5C3AQ9H0P0 336 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 PLEKHA4Q9H4M7 779 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 MAN1C1Q9NR34 630 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 SLAMF8Q9P0V8 285 aa9.94□□□□□ -0.82
GTF2A1-204ENST00000556268 ARL5CA6NH57 179 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 SCAMP3O14828 347 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 RFPL2O75678 378 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 SSBP05455 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 ITGA4P13612 1032 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 ARL2P36404 184 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 AK2P54819 239 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 RACK1P63244 317 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 SPIRE1Q08AE8 756 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 INF2Q27J81 1249 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 OGFOD2Q6N063 350 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 OTUD6AQ7L8S5 288 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 NLRC3Q7RTR2 1065 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 TSPYL5Q86VY4 417 aaPredicted RBP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 TCP11Q8WWU5 503 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 MRRFQ96E11 262 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 MYADMQ96S97 322 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 GAD1Q99259 594 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 HSD17B14Q9BPX1 270 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 PHF20Q9BVI0 1012 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 COLEC11Q9BWP8 271 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 EIF2AQ9BY44 585 aaKnown RBP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 TM6SF1Q9BZW5 370 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 CSRNP2Q9H175 543 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 RGL1Q9NZL6 768 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 DLGAP2Q9P1A6 1054 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 FNIP2Q9P278 1114 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 DUSP13Q9UII6 198 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 GIT1Q9Y2X7 761 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 IPPQ9Y573 584 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
GTF2A1-204ENST00000556268 SHISA3A0PJX4 238 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 TSPAN1O60635 241 aa9.92□□□□□ -0.82
GTF2A1-204ENST00000556268 LYPLA2O95372 231 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms