RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 KRT10P13645 584 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 CPEP16870 476 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 PRDX5P30044 214 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 RENBPP51606 427 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 ACAP2Q15057 778 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 L1TD1Q5T7N2 865 aaKnown RBP4.37□□□□□ -1.71
SCFD1-218ENST00000556256 FAM160B1Q5W0V3 765 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 GIMAP6Q6P9H5 292 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 PGM2L1Q6PCE3 622 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 COA7Q96BR5 231 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 SLC46A1Q96NT5 459 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 CAMK1GQ96NX5 476 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 SIGLEC11Q96RL6 698 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 CIPCQ9C0C6 399 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 TBX22Q9Y458 520 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 SQORQ9Y6N5 450 aa4.37□□□□□ -1.71
SCFD1-218ENST00000556256 LRRC14BA6NHZ5 514 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 M0QYG6 137 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 DCLK1O15075 740 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 ERC2O15083 957 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 CYP19A1P11511 503 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-218ENST00000556256 MT3P25713 68 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 ARHGAP40Q5TG30 622 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 RNF219Q5W0B1 726 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-218ENST00000556256 MTHFD1LQ6UB35 978 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 FAM46DQ8NEK8 389 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 ZNF398Q8TD17 642 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 THOC3Q96J01 351 aaKnown RBP4.36□□□□□ -1.71
SCFD1-218ENST00000556256 PTDSS2Q9BVG9 487 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 MDFICQ9P1T7 246 aa4.36□□□□□ -1.71
SCFD1-218ENST00000556256 CFAP20Q9Y6A4 193 aaKnown RBP4.36□□□□□ -1.71
SCFD1-218ENST00000556256 TOMM40O96008 361 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 PPIFP30405 207 aaKnown RBP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 TPTEP56180 551 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 RHDQ02161 417 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 KIF23Q02241 960 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 ZNF91Q05481 1191 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 SRSF1Q07955 248 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 FAM187BQ17R55 369 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 INAVAQ3KP66 663 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 ZNF628Q5EBL2 1059 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 ADAMTS18Q8TE60 1221 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 DDX17Q92841 729 aaKnown RBP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 TNPO1Q92973 898 aaKnown RBP4.35□□□□□ -1.71
SCFD1-218ENST00000556256 TTYH3Q9C0H2 523 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 TMEM184CQ9NVA4 438 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 HEY2Q9UBP5 337 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 GABRQQ9UN88 632 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 ZMYM2Q9UBW7 1377 aa4.35□□□□□ -1.71
SCFD1-218ENST00000556256 TMEM232C9JQI7 657 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 KRT86O43790 486 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 GNAI2P04899 355 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 DLDP09622 509 aaKnown RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 FPR3P25089 353 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 CDKN2AP42771 156 aaKnown RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 ME1P48163 572 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 MASP1P48740 699 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 PXNP49023 591 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 FXR1P51114 621 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 KRT81Q14533 505 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 LONRF3Q496Y0 759 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 RNASE12Q5GAN4 147 aaKnown RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 RGS7BPQ6MZT1 257 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 LAYNQ6UX15 382 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 C18orf65Q6ZTR6 163 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 PIM3Q86V86 326 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 SLC15A3Q8IY34 581 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 ZNF548Q8NEK5 533 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-218ENST00000556256 MKS1Q9NXB0 559 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 TFCP2L1Q9NZI6 479 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 PI4KBQ9UBF8 816 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 HESX1Q9UBX0 185 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 ZDHHC8Q9ULC8 765 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 PCDHA3Q9Y5H8 950 aa4.34□□□□□ -1.71
SCFD1-218ENST00000556256 TCF20Q9UGU0 1960 aaKnown RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 TLDC2A0PJX2 215 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PCDHGA12O60330 932 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 TLR2O60603 784 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 ATXN1LP0C7T5 689 aaKnown RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PIM1P11309 404 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 LOXL3P58215 753 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 LILRA4P59901 499 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 BCDIN3DQ7Z5W3 292 aaKnown RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 CBARPQ8N350 705 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 C3orf20Q8ND61 904 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 C1orf162Q8NEQ5 155 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 MRPL46Q9H2W6 279 aaKnown RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 ASIC5Q9NY37 505 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 SERPINB13Q9UIV8 391 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 ICKQ9UPZ9 632 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PCDHGA8Q9Y5G5 932 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PCDHGA7Q9Y5G6 932 aa4.33□□□□□ -1.72
SCFD1-218ENST00000556256 PCDHGA6Q9Y5G7 932 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms