RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 VAMP2P63027 116 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF844Q08AG5 666 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 SCAPQ12770 1279 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TRPC3Q13507 836 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 ATP1A4Q13733 1029 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 BOP1Q14137 746 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 VPS53Q5VIR6 699 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 MANEALQ5VSG8 457 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TAPT1Q6NXT6 567 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 MZT2BQ6NZ67 158 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 FAM180BQ6P0A1 224 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 KCTD20Q7Z5Y7 419 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PLEKHH3Q7Z736 793 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 RASGRP3Q8IV61 690 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PCYOX1LQ8NBM8 494 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PSD4Q8NDX1 1056 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 OR52N2Q8NGI0 321 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 OR1N1Q8NGS0 311 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 OR6Y1Q8NGX8 325 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 SCAMP5Q8TAC9 235 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 BPIFB1Q8TDL5 484 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 AFG1LQ8WV93 481 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 ST8SIA2Q92186 375 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 HDAC2Q92769 488 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 DACT3Q96B18 629 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 MAELQ96JY0 434 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF668Q96K58 619 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 PNKPQ96T60 521 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 REXO4Q9GZR2 422 aaKnown RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 SLC25A32Q9H2D1 315 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 TAF1DQ9H5J8 278 aaPredicted RBP3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 SEC61A2Q9H9S3 476 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 SMC4Q9NTJ3 1288 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 LPAR3Q9UBY5 353 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 RAD54BQ9Y620 910 aa3.45□□□□□ -1.86
MTHFD1-212ENST00000555858 CCDC196A0A1B0GTZ2 297 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 CCDC195A0A1B0GUA6 201 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TCAF2A6NFQ2 919 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 B4E171 279 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 H0Y3Z8 333 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 RGS10O43665 173 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 B4GALT3O60512 393 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 SRGAP2O75044 1071 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 MFAP3LO75121 409 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 BAIAP3O94812 1187 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 VIPP01282 170 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TK1P04183 234 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 PRKCBP05771 671 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ANXA6P08133 673 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 INHBBP09529 407 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 IFIT1P09914 478 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 SRGAP2BP0DMP2 458 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ARP10275 920 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 CHRM3P20309 590 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 CAPN3P20807 821 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TSPAN7P41732 249 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 LIFRP42702 1097 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 GCLCP48506 637 aaPredicted RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 AARSP49588 968 aaKnown RBP eCLIP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 IRAK1P51617 712 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 AFF3P51826 1226 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 DGKEP52429 567 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF134P52741 427 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 CHN2P52757 468 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 BCAT1P54687 386 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 LILRA4P59901 499 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 UBE3AQ05086 875 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 GPS1Q13098 491 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 CUL4BQ13620 913 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ZIK1Q3SY52 487 aaPredicted RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TAF2Q6P1X5 1199 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 SLC30A10Q6XR72 485 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ATG14Q6ZNE5 492 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 RAB11FIP2Q7L804 512 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 HEATR4Q86WZ0 1026 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF280BQ86YH2 543 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 SIAH1Q8IUQ4 282 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 LINC01356Q8N9X3 169 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 MDGA1Q8NFP4 955 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 POC1BQ8TC44 478 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ZNF622Q969S3 477 aaKnown RBP eCLIP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 GRAMD1AQ96CP6 724 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 MARS2Q96GW9 593 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TMEM176AQ96HP8 235 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 PHACTR3Q96KR7 559 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 KCNC2Q96PR1 638 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TRAPPC9Q96Q05 1148 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 MED15Q96RN5 788 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 LMF1Q96S06 567 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 MPHOSPH9Q99550 1183 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 PLA2G12BQ9BX93 195 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 TWSG1Q9GZX9 223 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 ZCWPW1Q9H0M4 648 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 OSBPL5Q9H0X9 879 aaPredicted RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 EPS8L2Q9H6S3 715 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 JMJD4Q9H9V9 463 aa3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 HECAQ9UBI9 543 aaPredicted RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 LAS1LQ9Y4W2 734 aaKnown RBP3.44□□□□□ -1.86
MTHFD1-212ENST00000555858 PRSS47A8MTI9 375 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms