RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 GJA10Q969M2 543 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 MRGPRX1Q96LB2 322 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 PPP1R10Q96QC0 940 aaKnown RBP12.38□□□□□ -0.43
ABCD4-222ENST00000555617 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 ADAMTS1Q9UHI8 967 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 SATB2Q9UPW6 733 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
ABCD4-222ENST00000555617 CDRT15L2A8MXV6 281 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 NOBOXO60393 691 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 CYP17A1P05093 508 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 NPEPPSP55786 919 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-222ENST00000555617 C3orf38Q5JPI3 329 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 ANO5Q75V66 913 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 ATCAYQ86WG3 371 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 TMEM130Q8N3G9 435 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 PI4K2BQ8TCG2 481 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
ABCD4-222ENST00000555617 PDCD6IPQ8WUM4 868 aaKnown RBP12.37□□□□□ -0.43
ABCD4-222ENST00000555617 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 MAFFQ9ULX9 164 aa12.37□□□□□ -0.43
ABCD4-222ENST00000555617 H7C4K7 107 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 CHMP2AO43633 222 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
ABCD4-222ENST00000555617 INF2Q27J81 1249 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
ABCD4-222ENST00000555617 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 MARVELD3Q96A59 401 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
ABCD4-222ENST00000555617 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 TM9SF3Q9HD45 589 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
ABCD4-222ENST00000555617 DCHS2Q6V1P9 2916 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ACANP16112 2415 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 A0A0A0MRY4 1105 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 SYN3O14994 580 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 CSO75390 466 aaKnown RBP12.35□□□□□ -0.43
ABCD4-222ENST00000555617 TADA3O75528 432 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 CDC25CP30307 473 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ALDH1A3P47895 512 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 PTENP60484 403 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ILKQ13418 452 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-222ENST00000555617 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ZNF280DQ6N043 979 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 KIAA1324Q6UXG2 1013 aaKnown RBP12.35□□□□□ -0.43
ABCD4-222ENST00000555617 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 CYP2S1Q96SQ9 504 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 PNKPQ96T60 521 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-222ENST00000555617 TBC1D22BQ9NU19 505 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 CUEDC1Q9NWM3 386 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-222ENST00000555617 ASB3Q9Y575 518 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
ABCD4-222ENST00000555617 MTMR11A4FU01 709 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
ABCD4-222ENST00000555617 MARCH6O60337 910 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 FGF19O95750 216 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 F11P03951 625 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 APODP05090 189 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 ZXDBP98169 803 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 CADM4Q8NFZ8 388 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
ABCD4-222ENST00000555617 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 USP36Q9P275 1121 aaKnown RBP12.34□□□□□ -0.43
ABCD4-222ENST00000555617 TCEAL9Q9UHQ7 104 aa12.34□□□□□ -0.43
ABCD4-222ENST00000555617 ZNF106Q9H2Y7 1883 aaKnown RBP12.34□□□□□ -0.43
ABCD4-222ENST00000555617 CROCCQ5TZA2 2017 aa12.33□□□□□ -0.43
ABCD4-222ENST00000555617 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 ARHGAP10A1A4S6 786 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 TRIM24O15164 1050 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 GJB6O95452 261 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 RARGP13631 454 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 CKMT2P17540 419 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 GRIA4P48058 902 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 DUSP3P51452 185 aaPredicted RBP12.33□□□□□ -0.44
ABCD4-222ENST00000555617 NLRP12P59046 1061 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 KCNAB2Q13303 367 aa12.33□□□□□ -0.44
ABCD4-222ENST00000555617 EGFLAMQ63HQ2 1017 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms