RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 THEM5Q8N1Q8 247 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 PIP4P2Q8N4L2 257 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 DEFB119Q8N690 84 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 TMEM161BQ8NDZ6 487 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 CRELD1Q96HD1 420 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 TSPAN18Q96SJ8 248 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 FOXD4L1Q9NU39 408 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 UXTQ9UBK9 157 aaPredicted RBP10.4□□□□□ -0.74
SCFD1-215ENST00000555259 DKK4Q9UBT3 224 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 PCDHB5Q9Y5E4 795 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 CFAP46Q8IYW2 2715 aa10.4□□□□□ -0.74
SCFD1-215ENST00000555259 TCRBV21S2A2A0A5A6 115 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ANO9A1A5B4 782 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 E9PMD0 336 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 CYB561D2O14569 222 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 FAM189A1O60320 539 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ADAM23O75077 832 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 C1QL1O75973 258 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 NOL4O94818 638 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ADRB2P07550 413 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SYPP08247 313 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 TCF3P15923 654 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ZNF33AQ06730 810 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 MESP2Q0VG99 397 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 DDR2Q16832 855 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 EOGTQ5NDL2 527 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 JADE1Q6IE81 842 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 RINT1Q6NUQ1 792 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 TOGARAM2Q6ZUX3 1019 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 C1orf186Q6ZWK4 172 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 DCP1BQ8IZD4 617 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PGBD3Q8N328 593 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ARL14EPQ8N8R7 260 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 TRMT2BQ96GJ1 504 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PYM1Q9BRP8 204 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PI4K2AQ9BTU6 479 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ZDHHC4Q9NPG8 344 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 TMLHEQ9NVH6 421 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 GCNT4Q9P109 453 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 LRWD1Q9UFC0 647 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 DNM3Q9UQ16 869 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ZNF462Q96JM2 2506 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 A0A087WV48 116 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 C2orf78A6NCI8 922 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 CYSRT1A8MQ03 144 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 KIR2DL1P43626 348 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 FOSBP53539 338 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SMTNP53814 917 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SAFBQ15424 915 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ZNF174Q15697 407 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 KYAT1Q16773 422 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 EMC10Q5UCC4 262 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SLC36A4Q6YBV0 504 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 GLRX5Q86SX6 157 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SLCO6A1Q86UG4 719 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 SNX29Q8TEQ0 813 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 LRRC15Q8TF66 581 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 YTHDC1Q96MU7 727 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 UBL7Q96S82 380 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 RPF1Q9H9Y2 349 aaKnown RBP10.39□□□□□ -0.75
SCFD1-215ENST00000555259 ARHGAP26Q9UNA1 814 aa10.39□□□□□ -0.75
SCFD1-215ENST00000555259 PTPRBP23467 1997 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 SCN1AP35498 2009 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 A0A1W2PQD8 194 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 MYMKA6NI61 221 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 OGTO15294 1046 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 CBFA2T3O75081 653 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 KAT7O95251 611 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 CYP17A1P05093 508 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 NFICP08651 508 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 PLS3P13797 630 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 HDCP19113 662 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 GUCY2CP25092 1073 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 SLC6A11P48066 632 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 TAF6P49848 677 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 ZXDBP98169 803 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 ORC2Q13416 577 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-215ENST00000555259 TRIM29Q14134 588 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 KCNB1Q14721 858 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 NFE2Q16621 373 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-215ENST00000555259 TMPRSS7Q7RTY8 843 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 BICD1Q96G01 975 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 PNKPQ96T60 521 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 TIPINQ9BVW5 301 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 CCSER1Q9C0I3 900 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 KIAA1522Q9P206 1035 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-215ENST00000555259 KCNG1Q9UIX4 513 aa10.38□□□□□ -0.75
SCFD1-215ENST00000555259 CEP192Q8TEP8 1941 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms