RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 AHDC1Q5TGY3 1603 aaPredicted RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 H0YCG3 227 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 H3BRJ5 948 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 UNC5CO95185 931 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 CCND1P24385 295 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 RPL22P35268 128 aaKnown RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 SGSM1Q2NKQ1 1148 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 GLRA4Q5JXX5 417 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 CGB2Q6NT52 195 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 MRPL4Q9BYD3 311 aaKnown RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 RPF1Q9H9Y2 349 aaKnown RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 TXNDC9O14530 226 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 EPHB1P54762 984 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 ROR1Q01973 937 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 RCN1Q15293 331 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 PTPN20Q4JDL3 420 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 EEF1DP3Q658K8 133 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 CAPRIN2Q6IMN6 1127 aaKnown RBP12.42□□□□□ -0.42
XRCC3-208ENST00000554811 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 TTC25Q96NG3 672 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 AS3MTQ9HBK9 375 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 IL1RAPL1Q9NZN1 696 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 HMGXB4Q9UGU5 601 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 GRID1Q9ULK0 1009 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 COQ4Q9Y3A0 265 aa12.42□□□□□ -0.42
XRCC3-208ENST00000554811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 LGR5O75473 907 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 RGS20O76081 388 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 IL1R2P27930 398 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 PHKA2P46019 1235 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ATXN3P54252 364 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 SPDYCQ5MJ68 293 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 RFWD3Q6PCD5 774 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 CDHR1Q96JP9 859 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 YY1AP1Q9H869 796 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ACSS2Q9NR19 701 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 CENPFP49454 3210 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 TP73O15350 636 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MTA2O94776 668 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 TOP3BO95985 862 aaKnown RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 NAIF1Q69YI7 327 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ALLCQ8N6M5 410 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 C12orf29Q8N999 325 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 CCNYQ8ND76 341 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MIEF2Q96C03 454 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 TIPINQ9BVW5 301 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 FAM49AQ9H0Q0 323 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 hCG_1818297A0A087WSY0 165 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 TMEM191CA6NGB0 347 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MYL2P10916 166 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MMP8P22894 467 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MIPP30301 263 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ABCG1P45844 678 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ZNF677Q86XU0 584 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 HACE1Q8IYU2 909 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 CPXM1Q96SM3 734 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 DHX35Q9H5Z1 703 aaKnown RBP12.41□□□□□ -0.42
XRCC3-208ENST00000554811 ARHGAP28Q9P2N2 729 aa12.41□□□□□ -0.42
XRCC3-208ENST00000554811 MEI4A8MW99 385 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 TMEM63AO94886 807 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 PDGFRBP09619 1106 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 BCAR1P56945 870 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 NR1H3Q13133 447 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 Q3C1V9 767 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-208ENST00000554811 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 NME8Q8N427 588 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 FAM13CQ8NE31 585 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 CYB561D2O14569 222 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
XRCC3-208ENST00000554811 RSPH3Q86UC2 560 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 FBXO16Q8IX29 292 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-208ENST00000554811 TMEM120AQ9BXJ8 343 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 GGA3Q9NZ52 723 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
XRCC3-208ENST00000554811 ZC3H7BQ9UGR2 993 aaKnown RBP12.4□□□□□ -0.42
XRCC3-208ENST00000554811 SMG5Q9UPR3 1016 aaKnown RBP12.4□□□□□ -0.42
XRCC3-208ENST00000554811 EME2A4GXA9 379 aaPredicted RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 CYP1A1P04798 512 aaPredicted RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.43
XRCC3-208ENST00000554811 ADORA2BP29275 332 aa12.4□□□□□ -0.43
XRCC3-208ENST00000554811 ZNF200P98182 395 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms