RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 LCLAT1Q6UWP7 414 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 RSPO2Q6UXX9 243 aaPredicted RBP8.54□□□□□ -1.04
LINC01397-201ENST00000554808 TRIM72Q6ZMU5 477 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 RBM23Q86U06 439 aaKnown RBP8.54□□□□□ -1.04
LINC01397-201ENST00000554808 FAM35AQ86V20 835 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 VPS36Q86VN1 386 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 PALB2Q86YC2 1186 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 MICALL1Q8N3F8 863 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 ANKRD52Q8NB46 1076 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 MSANTD4Q8NCY6 345 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 KAT5Q92993 513 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 SPATA17Q96L03 361 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 C8orf48Q96LL4 319 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 NOX5Q96PH1 765 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 TWNKQ96RR1 684 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 TMEM209Q96SK2 561 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 UBXN6Q9BZV1 441 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 ZNF518BQ9C0D4 1074 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 MIS12Q9H081 205 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 DPEP3Q9H4B8 488 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 CYP4F11Q9HBI6 524 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 CSNK1G1Q9HCP0 422 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 ZNHIT6Q9NWK9 470 aaKnown RBP8.54□□□□□ -1.04
LINC01397-201ENST00000554808 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 AIPL1Q9NZN9 384 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 HMGXB4Q9UGU5 601 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC01397-201ENST00000554808 COG5Q9UP83 839 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 FAM50BQ9Y247 325 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 NME7Q9Y5B8 376 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 INSL5Q9Y5Q6 135 aa8.54□□□□□ -1.04
LINC01397-201ENST00000554808 O00370 1275 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 FOXN3O00409 490 aaPredicted RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PER2O15055 1255 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 EPHB6O15197 1021 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CYP26A1O43174 497 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ADAM12O43184 909 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 THAP12O43422 761 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ATP2C2O75185 946 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 AP1G2O75843 785 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GFPT2O94808 682 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CSPG5O95196 566 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 RTN3O95197 1032 aaPredicted RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 LSM8O95777 96 aaKnown RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GYPCP04921 128 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 OR4Q2P0C623 313 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CYP11B1P15538 503 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 NPR3P17342 541 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 BDNFP23560 247 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 HNRNPH3P31942 346 aaKnown RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CLCN1P35523 988 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 KRT9P35527 623 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GRIK1P39086 918 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ACADSBP45954 432 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PPP3CCP48454 512 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 KLK7P49862 253 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 DUSP4Q13115 394 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GSE1Q14687 1217 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 TAF12Q16514 161 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PUS10Q3MIT2 529 aaKnown RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CES5AQ6NT32 575 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ANKRD54Q6NXT1 300 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GJB7Q6PEY0 223 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 LRRTM3Q86VH5 581 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 FUKQ8N0W3 1084 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 SLC7A14Q8TBB6 771 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 SLC2A14Q8TDB8 520 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 STK32AQ8WU08 396 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ZNF606Q8WXB4 792 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 BAP1Q92560 729 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ELMO3Q96BJ8 720 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 ZNF512Q96ME7 567 aaPredicted RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 NECTIN4Q96NY8 510 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 SEPT5Q99719 369 aaPredicted RBP8.53□□□□□ -1.04
LINC01397-201ENST00000554808 DUSP16Q9BY84 665 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PRKD2Q9BZL6 878 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 GPR88Q9GZN0 384 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 LHX5Q9H2C1 402 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PDCL3Q9H2J4 239 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 FBXO44Q9H4M3 255 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 KRT82Q9NSB4 513 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 FAM49BQ9NUQ9 324 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CLDND1Q9NY35 253 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 TSPAN16Q9UKR8 245 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 YIPF1Q9Y548 306 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 PCDHGC5Q9Y5F6 944 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 CLUHO75153 1309 aa8.53□□□□□ -1.04
LINC01397-201ENST00000554808 DOCK4Q8N1I0 1966 aa8.52□□□□□ -1.05
LINC01397-201ENST00000554808 LRRC53A6NM62 1247 aa8.52□□□□□ -1.05
LINC01397-201ENST00000554808 SOBPA7XYQ1 873 aa8.52□□□□□ -1.05
LINC01397-201ENST00000554808 AKR1B15C9JRZ8 316 aaPredicted RBP8.52□□□□□ -1.05
LINC01397-201ENST00000554808 M0QYV0 167 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms