RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RBM10P98175 930 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 STRN3Q13033 797 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ALX1Q15699 326 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 SKOR2Q2VWA4 1001 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 GPATCH4Q5T3I0 446 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 OVCH1Q7RTY7 1134 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 FRMD5Q7Z6J6 570 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ADGRD2Q7Z7M1 963 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 RBM23Q86U06 439 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ATP8B4Q8TF62 1192 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 POF1BQ8WVV4 589 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 TRMT2BQ96GJ1 504 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 NEK1Q96PY6 1258 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CDCA3Q99618 268 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 KCNJ15Q99712 375 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ORAI3Q9BRQ5 295 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 XYLT2Q9H1B5 865 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 PXMP2Q9NR77 195 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 SETD4Q9NVD3 440 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 MAP3K20Q9NYL2 800 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CBLCQ9ULV8 474 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 BARX2Q9UMQ3 279 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 DDX19BQ9UMR2 479 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 PARP14Q460N5 1801 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 TECTAO75443 2155 aa5.59□□□□□ -1.52
ATXN3-228ENST00000554592 TET1Q8NFU7 2136 aa5.59□□□□□ -1.52
ATXN3-228ENST00000554592 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 ZFHX2Q9C0A1 2572 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 CBX4O00257 560 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 PDGFBP01127 241 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 LGALS2P05162 132 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 STAG3L1P0CL83 205 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 MYCLP12524 364 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 HOXB8P17481 243 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 CLCN5P51795 746 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SP2Q02086 613 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 UBE3AQ05086 875 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 DHCR24Q15392 516 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 CDC37Q16543 378 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 RRP12Q5JTH9 1297 aaKnown RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 MROH9Q5TGP6 573 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 TAF2Q6P1X5 1199 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 TMEM184AQ6ZMB5 413 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 STOX1Q6ZVD7 989 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 DGKHQ86XP1 1220 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 DCP2Q8IU60 420 aaKnown RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SAMD3Q8N6K7 520 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 TMEM105Q8N8V8 129 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SEC14L1Q92503 715 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 PDCD2LQ9BRP1 358 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 S1PR5Q9H228 398 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 SCN5AQ14524 2016 aa5.58□□□□□ -1.52
ATXN3-228ENST00000554592 NRCAMQ92823 1304 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 ZNF891A8MT65 544 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 CCER2I3L3R5 266 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 PER2O15055 1255 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 FOXP2O15409 715 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 GLP2RO95838 553 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 CFBP00751 764 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 FGAP02671 866 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 C8BP07358 591 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 GHRP10912 638 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 PCP11498 1178 aaKnown RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 HSD17B4P51659 736 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 ADAM17P78536 824 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 GHRHRQ02643 423 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 NEDD9Q14511 834 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 LPIN1Q14693 890 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 DUSP6Q16828 381 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 ANKRD54Q6NXT1 300 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 FAM43BQ6ZT52 329 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 LHFPL2Q6ZUX7 228 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 DGLUCYQ7Z3D6 616 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 KIF18BQ86Y91 864 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 ADGRF4Q8IZF3 695 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 NXPE1Q8N323 547 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
ATXN3-228ENST00000554592 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 SYT3Q9BQG1 590 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
ATXN3-228ENST00000554592 FTHL17Q9BXU8 183 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms