RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PCDHGC3Q9UN70 934 aa16.46■□□□□ 0.23
ARHGEF40-203ENST00000554514 SIGLEC16A6NMB1 481 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 RPSAP08865 295 aaKnown RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 RAD23BP54727 409 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 MYO1EQ12965 1108 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 MKRN3Q13064 507 aaKnown RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 SEPT7Q16181 437 aaKnown RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 GALNTL6Q49A17 601 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 FAM102AQ5T9C2 384 aaPredicted RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 LVRNQ6Q4G3 990 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 PALM2Q8IXS6 379 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 C1orf127Q8N9H9 656 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 FBF1Q8TES7 1133 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 HEXIM2Q96MH2 286 aaKnown RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 PSMC3IPQ9P2W1 217 aaPredicted RBP16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 SHOC2Q9UQ13 582 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 CHMP2BQ9UQN3 213 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 ACTL7BQ9Y614 415 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 CLUHO75153 1309 aa16.46■□□□□ 0.22
ARHGEF40-203ENST00000554514 POLR2AP24928 1970 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 CFAP73A6NFT4 308 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 LACTBL1A8MY62 500 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 IRF6O14896 467 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 SIP14410 1827 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 MIPP30301 263 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 EIF3EP60228 445 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 JADE1Q6IE81 842 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 XYLT1Q86Y38 959 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ERP27Q96DN0 273 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 MYLK2Q9H1R3 596 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 PDGFCQ9NRA1 345 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 XPO7Q9UIA9 1087 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ADM5C9JUS6 153 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 GPR25O00155 361 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ACKR2O00590 384 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 TMEM63AO94886 807 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 KRT7P08729 469 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 EDNRBP24530 442 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ARL4CP56559 192 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ACCSLQ4AC99 568 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 PPIL6Q8IXY8 311 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ANKLE1Q8NAG6 615 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 TMEM237Q96Q45 408 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 CSADQ9Y600 493 aa16.45■□□□□ 0.22
ARHGEF40-203ENST00000554514 MED7O43513 233 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 MICAL2O94851 1124 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 GEMIN4P57678 1058 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 SURF1Q15526 300 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 PREPLQ4J6C6 727 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 TSHZ1Q6ZSZ6 1077 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 STAMBPL1Q96FJ0 436 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 ADPGKQ9BRR6 497 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 ETNK1Q9HBU6 452 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 RBP3P10745 1247 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 TARSP26639 723 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 GBP2P32456 591 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 GRM1Q13255 1194 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 C15orf59Q2T9L4 293 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 CELF3Q5SZQ8 465 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 GBP7Q8N8V2 638 aaPredicted RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 SLC4A11Q8NBS3 891 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 SPATA18Q8TC71 538 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 CLMNQ96JQ2 1002 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 PAFAH2Q99487 392 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 WDR83Q9BRX9 315 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 C2orf40Q9H1Z8 148 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 RABGEF1Q9UJ41 708 aa16.44■□□□□ 0.22
ARHGEF40-203ENST00000554514 EVPLQ92817 2033 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 RNF8O76064 485 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 FGFR1P11362 822 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 RGS7P49802 495 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 PTPN11Q06124 597 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 OVGP1Q12889 678 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 NR1H3Q13133 447 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 SH3D19Q5HYK7 790 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 DARS2Q6PI48 645 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 GIMAP7Q8NHV1 300 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 DENND1AQ8TEH3 1009 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 AGAP11Q8TF27 550 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 PIWIL1Q96J94 861 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 GPATCH2LQ9NWQ4 482 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 USP18Q9UMW8 372 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 FARP1Q9Y4F1 1045 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 TGFB3P10600 412 aa16.43■□□□□ 0.22
ARHGEF40-203ENST00000554514 ADRA1DP25100 572 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms