RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 GMEB2Q9UKD1 530 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 FBXO4Q9UKT5 387 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 ZMIZ1Q9ULJ6 1067 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
SHMT2-208ENST00000553868 EPN1Q9Y6I3 576 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-208ENST00000553868 IGF2RP11717 2491 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 GOLGA6L9A6NEM1 432 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 AKR1B10O60218 316 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 LILRB5O75023 590 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 NDUFA10O95299 355 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 USP8P40818 1118 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 CLLU1OSQ5K130 101 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 E4F1Q66K89 784 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-208ENST00000553868 RAD9BQ6WBX8 426 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 IRF2BP2Q7Z5L9 587 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 FAM71AQ8IYT1 594 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 RSPH1Q8WYR4 309 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 KREMEN1Q96MU8 473 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 ZMAT2Q96NC0 199 aaKnown RBP15.41■□□□□ 0.06
SHMT2-208ENST00000553868 XYLT2Q9H1B5 865 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 ELAC1Q9H777 363 aaKnown RBP15.41■□□□□ 0.06
SHMT2-208ENST00000553868 CYP3A43Q9HB55 503 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 APOBEC3GQ9HC16 384 aaKnown RBP15.41■□□□□ 0.06
SHMT2-208ENST00000553868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.061e-9■■■■■ 76.9
SHMT2-208ENST00000553868 KCND1Q9NSA2 647 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 ZSCAN32Q9NX65 697 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
SHMT2-208ENST00000553868 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 NUB1Q9Y5A7 615 aa15.41■□□□□ 0.06
SHMT2-208ENST00000553868 GCN1Q92616 2671 aaKnown RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 C1QTNF9BB2RNN3 333 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 EIF3CLB5ME19 914 aaKnown RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 THP07101 528 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 C1QTNF9P0C862 333 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 KRT5P13647 590 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 EIF4A3P38919 411 aaKnown RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 MLH1P40692 756 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 BCAR1P56945 870 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 TNNC1P63316 161 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 GLRA4Q5JXX5 417 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 HGSNATQ68CP4 663 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 SPOPLQ6IQ16 392 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 GLB1LQ6UWU2 654 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 BCL7CQ8WUZ0 217 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 GAD1Q99259 594 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
SHMT2-208ENST00000553868 BCO2Q9BYV7 579 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 GPR88Q9GZN0 384 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 DNAI2Q9GZS0 605 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 ANK1P16157 1881 aa15.4■□□□□ 0.06
SHMT2-208ENST00000553868 FLNBO75369 2602 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 SMG1Q96Q15 3661 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 ARL5CA6NH57 179 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 SOBPA7XYQ1 873 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 INPPL1O15357 1258 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 HOXA2O43364 376 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 PAX3P23760 479 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 LRPAP1P30533 357 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 KIF11P52732 1056 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 STARD6P59095 220 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 PTK2Q05397 1052 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 GRIK3Q13003 919 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 C9orf57Q5W0N0 161 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 ZNF598Q86UK7 904 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 CXorf38Q8TB03 319 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 KAT5Q92993 513 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 LPPQ93052 612 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 C18orf25Q96B23 403 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 TMEM169Q96HH4 297 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 PPP1R10Q96QC0 940 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 RPP25Q9BUL9 199 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 HAUS4Q9H6D7 363 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 NXF1Q9UBU9 619 aaKnown RBP15.39■□□□□ 0.05
SHMT2-208ENST00000553868 TUBGCP4Q9UGJ1 667 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 PCDHB4Q9Y5E5 795 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 ADGRG1Q9Y653 693 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 CITO14578 2027 aa15.39■□□□□ 0.05
SHMT2-208ENST00000553868 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 PTGESO14684 152 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 TBC1D4O60343 1298 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 CTSAP10619 480 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 CD72P21854 359 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 RPL9P32969 192 aaKnown RBP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 PDE6CP51160 858 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 CLCN4P51793 760 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 GUCY2FP51841 1108 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 SHC2P98077 582 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
SHMT2-208ENST00000553868 MTF1Q14872 753 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 UBXN2BQ14CS0 331 aa15.38■□□□□ 0.05
SHMT2-208ENST00000553868 SV2CQ496J9 727 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms