RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GCLMP48507 274 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MYL6P60660 151 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 RPL10AP62906 217 aaKnown RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 TWF1Q12792 350 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 DUSP4Q13115 394 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MTMR3Q13615 1198 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MORC3Q14149 939 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 KRT39Q6A163 491 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ANKRD40Q6AI12 368 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 PDZD4Q76G19 769 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 CREBRFQ8IUR6 639 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ZDHHC14Q8IZN3 488 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 TMEM130Q8N3G9 435 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MLKLQ8NB16 471 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 BORCS6Q96GS4 357 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ASB16Q96NS5 453 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 CORO1BQ9BR76 489 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ZCWPW1Q9H0M4 648 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 TMEM8AQ9HCN3 771 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ASAH2Q9NR71 780 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 IGSF5Q9NSI5 407 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 CDH9Q9ULB4 789 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 CTNND2Q9UQB3 1225 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MRPS23Q9Y3D9 190 aaKnown RBP8.91□□□□□ -0.98
PSEN1-209ENST00000553855 YIPF1Q9Y548 306 aa8.91□□□□□ -0.98
PSEN1-209ENST00000553855 MTMR11A4FU01 709 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 C2CD4DB7Z1M9 353 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 DCXO43602 365 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TACC1O75410 805 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 RHOP08100 348 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TRIM49P0CI25 452 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TRIM49CP0CI26 452 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 PTMSP20962 102 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 WARSP23381 471 aaKnown RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 ANXA13P27216 316 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 PLA2G5P39877 138 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 MXI1P50539 228 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 STX17P56962 302 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 SOWAHAQ2M3V2 549 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 ZACNQ401N2 412 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 ARHGAP15Q53QZ3 475 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 SASS6Q6UVJ0 657 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 FILIP1Q7Z7B0 1213 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TTC39CQ8N584 583 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 ATAD1Q8NBU5 361 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 NXPE3Q969Y0 559 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 ZNF707Q96C28 371 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TNIP3Q96KP6 325 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 SYT15Q9BQS2 421 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 C1QTNF1Q9BXJ1 281 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 CYLDQ9NQC7 956 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TMPRSS4Q9NRS4 437 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 LMBRD1Q9NUN5 540 aa8.9□□□□□ -0.98
PSEN1-209ENST00000553855 MAGEC2Q9UBF1 373 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-209ENST00000553855 TRIM49BA6NDI0 452 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 SEC24AO95486 1093 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 PDGFRBP09619 1106 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 HAPLN1P10915 354 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-209ENST00000553855 MYL4P12829 197 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 ACAT1P24752 427 aaKnown RBP8.89□□□□□ -0.99
PSEN1-209ENST00000553855 EPHA4P54764 986 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 YWHAEP62258 255 aaKnown RBP8.89□□□□□ -0.99
PSEN1-209ENST00000553855 DLG4P78352 724 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 CYP27A1Q02318 531 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FOXR2Q6PJQ5 311 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 SCARA5Q6ZMJ2 495 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 MTSS1LQ765P7 747 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FRMD5Q7Z6J6 570 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FAM114A1Q8IWE2 563 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 SCN4BQ8IWT1 228 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FBXL13Q8NEE6 735 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 CXorf38Q8TB03 319 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 EEF2KMTQ96G04 330 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FUBP3Q96I24 572 aaKnown RBP eCLIP8.89□□□□□ -0.99
PSEN1-209ENST00000553855 FAM84AQ96KN4 292 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 TMEM209Q96SK2 561 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 PI4K2AQ9BTU6 479 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 GPR88Q9GZN0 384 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 SLITRK6Q9H5Y7 841 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 EHD2Q9NZN4 543 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
PSEN1-209ENST00000553855 DNMT3BQ9UBC3 853 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms