RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ACO2Q99798 780 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TCHPQ9BT92 498 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ASCC2Q9H1I8 757 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TMEM134Q9H6X4 195 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC5A4Q9NY91 659 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 DDX56Q9NY93 547 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 NXF1Q9UBU9 619 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC24A2Q9UI40 661 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CPSF3Q9UKF6 684 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZMYND8Q9ULU4 1186 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SNCAIPQ9Y6H5 919 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 EIF4E1BA6NMX2 242 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZBTB42B2RXF5 422 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PIK3R2O00459 728 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ATP2A1O14983 1001 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TOM1L1O75674 476 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PRKCBP05771 671 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 KDELR1P24390 212 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ABCD1P33897 745 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TCF7P36402 384 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SLC18A1P54219 525 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PSMC1P62191 440 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 MMRN1Q13201 1228 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 NAA25Q14CX7 972 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 STXBP2Q15833 593 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CTC1Q2NKJ3 1217 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ANKRD20A2Q5SQ80 823 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SH3PXD2AQ5TCZ1 1133 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ANKRD20A1Q5TYW2 823 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ANKRD20A3Q5VUR7 823 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRNP1Q6NT89 227 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZPBP2Q6X784 338 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CEP128Q6ZU80 1094 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 NLRP9Q7RTR0 991 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 POLNQ7Z5Q5 900 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 XYLT1Q86Y38 959 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 THNSL1Q8IYQ7 743 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM71DQ8N9W8 422 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ATP11CQ8NB49 1132 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TTC8Q8TAM2 541 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PYROXD1Q8WU10 500 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 HSPH1Q92598 858 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 MIEF2Q96C03 454 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PIWIL1Q96J94 861 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CAMKK2Q96RR4 588 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 MIPEPQ99797 713 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ACSS3Q9H6R3 686 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SMYD3Q9H7B4 428 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 GINM1Q9NU53 330 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SENP1Q9P0U3 644 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 XPO7Q9UIA9 1087 aaKnown RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ZNF112Q9UJU3 913 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 DCTN4Q9UJW0 460 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 KAT6AQ92794 2004 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 OTOFQ9HC10 1997 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 C2orf71A6NGG8 1288 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 E7ESA3 106 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 OGTO15294 1046 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 MAFO75444 373 aaPredicted RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 ARIH2O95376 493 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 CXCL8P10145 99 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 KRT3P12035 628 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 EIF4BP23588 611 aaKnown RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 RFC5P40937 340 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 GCLCP48506 637 aaPredicted RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 ARL4CP56559 192 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 BASP1P80723 227 aaKnown RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 LAMTOR4Q0VGL1 99 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 PRKG1Q13976 671 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SETDB1Q15047 1291 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 TAZQ16635 292 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 TREML2Q5T2D2 321 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 PPP1R2P3Q6NXS1 205 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 RFWD3Q6PCD5 774 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 ADGRD1Q6QNK2 874 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 DLK2Q6UY11 383 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 C3orf62Q6ZUJ4 267 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 BZW1Q7L1Q6 419 aaKnown RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 RFX6Q8HWS3 928 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 BANPQ8N9N5 519 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 RNF149Q8NC42 400 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 LRRN4Q8WUT4 740 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SERAC1Q96JX3 654 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 TBC1D10AQ9BXI6 508 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 MRPL4Q9BYD3 311 aaKnown RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 AS3MTQ9HBK9 375 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SIX4Q9UIU6 781 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 EVPLQ92817 2033 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SOWAHBA6NEL2 793 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SIGLEC16A6NMB1 481 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 KBTBD13C9JR72 458 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 AVILO75366 819 aa7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 SKAP2O75563 359 aaPredicted RBP7.26□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM155BO75949 473 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms